About all I know is that if you correlate two images and look for the maximum
on the 2D correlation surface, the max tells you the point in cartesian space
where the images are best aligned.
I suspect, somehow, that this is not the whole story and that there is
probably a literature out there on this topic.
Any pointers to the literature and source code to get an overview perspective
of the area would thus be appreciated.
Thomas.
> I am looking for references/source code on the topic of
> image alignment/registration.
>
> About all I know is that if you correlate two images and look for the maximum
> on the 2D correlation surface, the max tells you the point in cartesian space
> where the images are best aligned.
>
> I suspect, somehow, that this is not the whole story and that there is
> probably a literature out there on this topic.
It depends on what you are trying to align,
a single point correlation will allow correction of
translation misallignment.
There is a real good discussion in the Manual of Remote Sensing.
Tim
> Any pointers to the literature and source code to get an overview perspective
> of the area would thus be appreciated.
Take a look at Section F, Image Registration, at
http://www.efg2.com/Lab/Library/ImageProcessing.htm
___
efg
Earl F. Glynn E-Mail: Earl...@att.net
Overland Park, KS USA
efg's Computer Lab: http://www.efg2.com/Lab
"A Survey of Image Registration" by Lisa G. Brown - That's all I
remember from memory, but should be good enough for you to find it. I
think it's published through ACM.
Best regards,
Thomas
--
Arithmetic is being able to count up to twenty without taking off your
shoes.
-- Mickey Mouse
Here are two on-line chapters that you might like, reviewing the
different approaches to image registration, and their conceptual bases:
http://www.loni.ucla.edu/~thompson/ElasChpt.html
http://www.loni.ucla.edu/~thompson/PDF/no_pics_ElasChpt.pdf
and
http://www.loni.ucla.edu/~thompson/IVCJ_99.html
http://www.loni.ucla.edu/~thompson/PDF/IVCJ_99.pdf
Good luck! - Paul
--------------------
Paul Thompson, Ph.D.
Assistant Professor of Neurology, Dept. Neurology
UCLA Brain Mapping Division & Lab of Neuro-Imaging
Howard Hughes Medical Institute
73-360 Brain Research Institute
CHS-UCLA, Los Angeles, CA 90095-1769
thom...@loni.ucla.edu
http://www.loni.ucla.edu/~thompson/thompson.html
http://www.loni.ucla.edu/~thompson/thompson_pubs.html
T.P Harte wrote:
>
> I am looking for references/source code on the topic of
> image alignment/registration.
>
> About all I know is that if you correlate two images and look for the maximum
> on the 2D correlation surface, the max tells you the point in cartesian space
> where the images are best aligned.
>
> I suspect, somehow, that this is not the whole story and that there is
> probably a literature out there on this topic.
>
Brown, L.G. (1992) "A survey of image registration techniques",
ACM Computing Surveys, 24(4), pp 325--376.
> I am looking for references/source code on the topic of
> image alignment/registration.
>
> About all I know is that if you correlate two images and look for the maximum
> on the 2D correlation surface, the max tells you the point in cartesian space
> where the images are best aligned.
>
> I suspect, somehow, that this is not the whole story and that there is
> probably a literature out there on this topic.
>
> Any pointers to the literature and source code to get an overview perspective
> of the area would thus be appreciated.
>
> Thomas
Have a look with your browser to :
Registration by maximization of mutual information (near Kullback-Leiber
distance)
for a probalistic approach which is pixel and shape "non-dependant" (Wells &
Viola, Medical Imaging), really interesting.
Or more classical phase-registration with Fourrier Transform for Translation or
Fourrier-Melin Transform for homothetie, rotation ...etc... (There are a lot of
thesis in Belgium about this subject, but i don't no why !!!) (2D, a little bit
more complicated in 3D).
--
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Sébastien Durbec Email : s...@zh.steria.ch
Tel : +41 (0)1 298 50 88 (direct)
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Sebastien Durbec <s...@zh.steria.ch> wrote in message
news:380F11AB...@zh.steria.ch...
Hello Thomas,
The first question is what are you trying to align? For medical images
Currently, There are two major competing registration algorithms, these methods
are the AIR method (based upon the minimizing the ratio of the signal intensities
of the two images) or surface matching. Both have been shown to give very
reasonable results. After you do the registration, do you need to warp the
image? That answer is another area of research. Anyway, I have sent you a
reference list for your use. Good luck.
Michael Jacobs
P.A. Van Den Elsen, J.D. Pol E, and M.A. Viergever, “Medical image matching: a
review with classification,” IEEE Eng. Med. Biol. 12, 26-39 (1993).
U. Peitryz, K. Herholz, A. Schuster et al., “Clinical applications of
registration and fusion of multimodality brain images from PET, SPECT, CT, and
MRI,” Eurp. J. Radiol. (21), 174-182 (1996).
P.A. Van Den Elsen and M.A. Viergever, “Marker-guided multimodality matching of
the brain,” Eur. Radiol. 4, 45-51 (1994).
A.P. Zijdenbos and B.M. Dawant, “Brain segmentation and white matter lesion
detection in MRI images,” Crit. Rev. Biomed. Eng. 22 (6), 401-465 (1994).
C. Barillot, D. Lemoine, L. Le Briquer et al., “Data fusion in medical imaging:
merging multimodal and multipatient images, identification of structures and 3D
display aspects,” Eur. J. Radiol. 17 (1), 22-27 (1993).
C.A. Pelizzari, GTY. Chen, and M. Reese, “Registration of multiple diagnostic
imaging scans using surface fitting,” in The Use of Computers in Radiation
Thearpy, edited by Bruinvis IAD (Elsevier Sciences Publishers, 1987), pp.
437-440.
C.A. Pelizzari, G.T. Chen, D.R. Spelbring et al., “Accurate three-dimensional
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T. Turkington, R. Jaszczak, C. Pelizzari et al., “Accuracy of registration
of PET, SPECT, MR images of a brain phantom,” J. Nucl. Med. 34 (34), 1587-1594
(1993).
H. Jiang, R.A. Robb, and K.S. Holton, “A new approach to 3D registration of
multimodality medical images by surface matching,” Visualization in Biomedical
Computing Proc SPIE (1808), 196-213 (1992).
H. Rusinek, WH. Tsu, AV. Levy et al., “Principal axes and surface fitting
methods for three-dimensional image registration,” J. Nucl. Med. 34 (11),
2019-2024 (1993).
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Med. Phys. 19 (2), 433-438 (1992).
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from multiple modalities in medical images,” Proc SPIE 626, 467-473 (1986).
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surfaces,” IEEE Comp. Graph. Appl. 10 (3), 52-62 (1990).
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transformation--a method for image registration,” J. Nucl. Med. 31 (10),
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R.P. Woods, S.T. Grafton , C.J. Holmes et al., “Automated image registration:
I. General methods and intrasubject, intramodality validation,” J. Comput.
Assist. Tomogr. 22 (1), 139-152 (1998).
R.P. Woods, S.T. Grafton, J.D. Watson et al., “Automated image registration: II.
Intersubject validation of linear and nonlinear models,” J. Comput. Assist.
Tomogr. 22 (1), 153-165 (1998).
W.M. Wells, P. Viola, H. Atsumi et al., “Multi-modal volume registration by
maximization of mutual information,” Medical Imaging Analysis 1 (1), 35-51
(1996).
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matching of deformed radiographic images to idealized atlas images,” J. Comput.
Assist. Tomogr. 7, 618-625 (1983).
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Image Process. 46, 1-21 (1989).
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deformations,” IEEE Trans. Patt. Anal. Mach. Intell. 11 (6), 567-585 (1989).
F.L. Bookstein, Morphometric Tools for Landmark Data: Geometry and Biology
(Cambridge University Press, Cambridge, England, 1991).
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Process. 15 (1981).
M. Moshfeghi, “Elastic matching of multimodality medical images,” CVGIP:
Graphical Models and Image Processing 53 (3), 271-282 (1991).
T. Schormann, A. Dabringhaus, and K. Zilles, “Statistics of deformations in
histology to improved alignment with MRI,” IEEE Trans. Med. Imaging 14 (1),
25-35 (1995).
P. Thompson and A.W. Toga, “A surface -based technique for warping
three-dimensional images of the brain,” IEEE Trans. Med. Imaging 15 (4), 402-417
(1996).
C. Davatzikos, “ Spatial transformation and registration of brain images using
elastically deformable models,” Computer Vis. and Image Understanding 66 (2),
207-222 (1997).
C. Davatzikos, “Spatial normalization of 3D brain images using deformable
models,” J. Comput. Assist. Tomogr. 20 (4), 656-665 (1996).
M.J.D. Powell, “An efficient method for finding the minimum of a function of
several variables without calculating derivatives,” Comput. J. 7, 155-162 (1964).
P.A. Freeborough, R.P. Woods, and N.C. Fox, “ Accurate registration of serial 3D
MR brain images and its application to visualizing change in neurodegenerative
disorders,” J. Comput. Assist. Tomogr. 20 (6), 1012-1022 (1996).
J. West, J.M. Fitzpatrick, M.Y. Wang et al., “Comparison and evaluation of
retrospective intermodality brain image registration techniques,” J. Comput.
Assist. Tomogr. 21 (4), 554-566 (1997).
L.P. Clarke, R.P. Velthuizen, M.A. Camacho et al., “MRI segmentation: methods
and applications,” Magn. Reson. Imaging 13 (3), 343-368 (1995).
JL. Boes, P. Bland, T. Weymouth et al., “Generating a normalized geometric
liver model using warping,” Invest. Radiol. 29 (3), 281-286 (1994).
A.C. Evans, W. Dai, L. Collins et al., “Warping of a computerized 3D atlas to
match brain volumes for quantitative neuroanatomical and functional analysis,”
SPIE 1995, 236-246 (1991).
G. Rizzo, M.C. Gilardi, A. Prinster et al., “An elastic computerized brain atlas
for the analysis of clinical PET/SPET data,” Eur. J. Nucl. Med. 22 (11),
1313-1318 (1995).
G. Rizzo, P. Scifo, M.C. Gilardi et al., “Matching a computerized brain atlas to
multimodal medical images,” Neuroimage Jul;6 (1), 59-69 (1997).
C. Sorlie, O. Bertrand, B. Yvert et al., “Matching of digitised brain atlas to
magnetic resonance images,” Med. Biol. Eng. Comput. 35 (3), 239-245 (1997).
T. Schormann, M. Von Matthey, A. Dabringhaus et al., “Alignment of 3D brain
data sets originating from MRI and histology,” Bioimaging 1 (2), 119-128 (1993).
C.A. Pelizzari, G.T. Chen, D.N. Levin et al., “Image registration based up
anatomic surface matching,” in Interactive Image-Guided Neurosurgery, edited by
R.J. Maciunas (American Association of Neurological Surgeons, New York, USA,
1993), Vol. 1, pp. 47-62.
S.C. Strother, Anderson J.R., X.L. Xu et al., “Quantitative comparisons of
image registration techniques based on high-resolution MRI of the brain,” J.
Comput. Assist. Tomogr. 18 (6), 954-962 (1994)
Jacobs MA, Windham JP, Soltanian-Zadeth H, Peck DJ. Knight RA Registration and
Warping of Magnetic Resonance Images to Histological Sections. Med Phys, 1999.
26(8) 1568-1578