Received: by 10.59.1.102 with SMTP id bf6mr6936585ved.21.1347377518760;
        Tue, 11 Sep 2012 08:31:58 -0700 (PDT)
X-BeenThere: sage-release@googlegroups.com
Received: by 10.221.0.70 with SMTP id nl6ls944317vcb.5.gmail; Tue, 11 Sep 2012
 08:31:58 -0700 (PDT)
MIME-Version: 1.0
Received: by 10.52.65.74 with SMTP id v10mr3056324vds.18.1347377518513; Tue,
 11 Sep 2012 08:31:58 -0700 (PDT)
Authentication-Results: ls.google.com; spf=pass (google.com: domain of
 kcris...@gmail.com designates internal as permitted sender)
 smtp.mail=kcris...@gmail.com; dkim=pass
 header...@gmail.com
Received: by v22g2000vbu.googlegroups.com with HTTP; Tue, 11 Sep 2012 08:31:58
 -0700 (PDT)
Date: Tue, 11 Sep 2012 08:31:58 -0700 (PDT)
In-Reply-To: <504F5396.8010408@cage.ugent.be>
References: <504D86BF.5010109@cage.ugent.be> <49121998-594c-48ec-b11f-a6584dbdc048@googlegroups.com>
 <f851af47-833b-4b4b-a5b2-d266da40fbb6@googlegroups.com> <30d4bfe1-9d8f-469e-a283-f5d70237614c@s14g2000vba.googlegroups.com>
 <504F5396.8010408@cage.ugent.be>
User-Agent: G2/1.0
X-HTTP-UserAgent: Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4)
 AppleWebKit/534.57.5 (KHTML, like Gecko) Version/5.1.7 Safari/534.57.2,gzip(gfe)
Message-ID: <37003a8f-29c9-4577-9de3-b5e57f9805af@v22g2000vbu.googlegroups.com>
Subject: Re: Releasing sage-5.3
From: kcrisman <kcris...@gmail.com>
To: sage-release <sage-release@googlegroups.com>
Content-Type: text/plain; charset=ISO-8859-1
Content-Transfer-Encoding: quoted-printable



On Sep 11, 11:07=A0am, Jeroen Demeyer <jdeme...@cage.ugent.be> wrote:
> On 2012-09-11 17:02, kcrisman wrote:
>
> > I tried testing an upgrade on this release, from 5.0 built on my
> > previous Intel Mac to 5.3 upgraded on this Lion Mac. =A0All seems to go
> > well, but then it wants to access mirrors one more time, claims that
> > gap and R need to be upgraded, and then (when I say yes), proceeds to
> > upgrade nearly the entire installation - or at least a large portion
> > of it - again! =A0It's done this twice now. =A0I'm just going to declin=
e
> > the R and GAP upgrades next time, but I'm wondering whether there is
> > some bug introduced in the latest changes to upgrade that would cause
> > this to happen. =A0I assume the hardware change in the meantime isn't
> > the issue, and I think 5.0 is where the gcc spkg was introduced,
> > right?
>
> There are some bugs with upgrading related to GCC, which is #13395
> (merged in sage-5.4.beta1).

Sorry, I thought that upgrading was now completely fixed, my
apologies.

>
> The fact that everything is built twice is #13415 (currently "new" but
> close to "needs review").

Good.

I do wonder about the final errors I'm getting.  Everything seems fine
except R, which has given me this problem several times now.  I think
that GAP may have failed the first time due to a race condition, but
I'm not going to track it down now.


mkdir /Users/.../sage-5.0/local/lib/R/include
mkdir: /Users/.../sage-5.0/local/lib/R/include: File exists
make[2]: *** [installdirs] Error 1
make[1]: *** [install] Error 1
make: *** [install] Error 1
Error installing R.

real	6m51.338s
user	9m51.308s
sys	0m41.199s
************************************************************************
Error installing package r-2.14.0.p3
************************************************************************


I think this is mentioned here [1] but I don't think there is a ticket
for it.  Not upgrading on OS X 10.7 seems problematic as well.

[1] http://trac.sagemath.org/sage_trac/ticket/13395#comment:12