Error running make for rApache on Red Hat EL5 64-bit virtual machine

[sheed03]

Hello, I am trying to install rApache version 1.1.14 on a virtual
machine running Red Hat Enterprise Linux 5. R version 2.12.2 is
installed and working correctly. As far as I can tell I have all of
the dependencies satisfied (also my system administrator installed
apreg2). Running configure with a few flags results in the makefile
being created, but running make causes the errors seen in the output
below. I ran the config with the following command:

./configure --with-apache2-apxs=/usr/sbin/apxs --with-R=/usr/bin/R --
with-apreq2-config=/usr/bin/apreq2-config

Here is the make error output:

[root@vm rapache-1.1.14]# make

Compiling mod_R

/usr/sbin/apxs -I/usr/include/R -I/usr/include/apreq2 -I/usr/include/
apr-1 -c mod_R.c -Wl,-rpath,/usr/lib64/R/lib -L/usr/lib64/R/lib -lR -
lapreq2
/usr/lib64/apr-1/build/libtool --silent --mode=compile gcc -prefer-pic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-
protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fno-strict-
aliasing -DLINUX=2 -D_REENTRANT -D_GNU_SOURCE -pthread -I/usr/include/
httpd -I/usr/include/apr-1 -I/usr/include/apr-1 -I/usr/include/R -
I/usr/include/apreq2 -I/usr/include/apr-1 -c -o mod_R.lo mod_R.c &&
touch mod_R.slo
mod_R.c:75:15: error: R.h: No such file or directory
mod_R.c:76:22: error: Rversion.h: No such file or directory
mod_R.c:77:24: error: Rinternals.h: No such file or directory
mod_R.c:78:22: error: Rdefines.h: No such file or directory
mod_R.c:97:24: error: Rinterface.h: No such file or directory
mod_R.c:99:23: error: Rembedded.h: No such file or directory
mod_R.c:100:25: error: R_ext/Parse.h: No such file or directory
mod_R.c:101:29: error: R_ext/Callbacks.h: No such file or directory
mod_R.c:102:28: error: R_ext/Rdynload.h: No such file or directory
mod_R.c:103:26: error: R_ext/Memory.h: No such file or directory
mod_R.c:125: error: expected specifier-qualifier-list before 'SEXP'
mod_R.c:131: error: expected specifier-qualifier-list before 'SEXP'
mod_R.c:144: error: expected specifier-qualifier-list before 'SEXP'
mod_R.c:159: warning: excess elements in struct initializer
mod_R.c:159: warning: (near initialization for 'MR_Request')
mod_R.c:159: warning: excess elements in struct initializer
mod_R.c:159: warning: (near initialization for 'MR_Request')
mod_R.c:159: warning: excess elements in struct initializer
mod_R.c:159: warning: (near initialization for 'MR_Request')
mod_R.c:159: warning: excess elements in struct initializer
mod_R.c:159: warning: (near initialization for 'MR_Request')
mod_R.c:159: warning: excess elements in struct initializer
mod_R.c:159: warning: (near initialization for 'MR_Request')
mod_R.c:197: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'MR_RApacheEnv'
mod_R.c:282: error: expected ')' before 's'
mod_R.c:283: error: expected declaration specifiers or '...' before
'Rboolean'
mod_R.c:286: error: expected ')' before 'a'
mod_R.c:300: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'NewLogical'
mod_R.c:301: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'NewInteger'
mod_R.c:302: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'NewEnv'
mod_R.c:303: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'ParseText'
mod_R.c:304: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'EvalExprs'
mod_R.c:305: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'ParseEval'
mod_R.c:306: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'CallFun1str'
mod_R.c:307: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'CallFun1expr'
mod_R.c:314: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'MyfindFun'
mod_R.c:316: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'AprTableToList'
mod_R.c: In function 'AP_hook_post_config':
mod_R.c:518: error: 'R_MAJOR' undeclared (first use in this function)
mod_R.c:518: error: (Each undeclared identifier is reported only once
mod_R.c:518: error: for each function it appears in.)
mod_R.c:518: error: 'R_MINOR' undeclared (first use in this function)
mod_R.c: In function 'AP_hook_request_handler':
mod_R.c:533: error: 'SEXP' undeclared (first use in this function)
mod_R.c:533: error: expected ';' before 'ret'
mod_R.c:558: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:563: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:564: error: 'RApacheHandler' has no member named 'parsedFile'
mod_R.c:564: warning: implicit declaration of function
'R_PreserveObject'
mod_R.c:564: error: 'RApacheHandler' has no member named 'parsedFile'
mod_R.c:564: warning: implicit declaration of function 'NewEnv'
mod_R.c:564: error: 'R_GlobalEnv' undeclared (first use in this
function)
mod_R.c:565: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:565: error: 'RApacheHandler' has no member named 'parsedFile'
mod_R.c:567: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:575: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:575: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:576: warning: implicit declaration of function 'PROTECT'
mod_R.c:576: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:577: error: 'RApacheHandler' has no member named 'parsedFile'
mod_R.c:579: error: 'ret' undeclared (first use in this function)
mod_R.c:579: warning: implicit declaration of function 'EvalExprs'
mod_R.c:579: error: 'RApacheHandler' has no member named 'parsedFile'
mod_R.c:579: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:580: warning: implicit declaration of function 'UNPROTECT'
mod_R.c:592: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:596: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:600: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:601: error: 'RApacheHandler' has no member named 'expr'
mod_R.c:603: error: 'RApacheHandler' has no member named 'expr'
mod_R.c:603: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:615: warning: implicit declaration of function 'IS_INTEGER'
mod_R.c:615: warning: implicit declaration of function 'LENGTH'
mod_R.c:617: warning: implicit declaration of function 'asInteger'
mod_R.c:618: warning: implicit declaration of function 'inherits'
mod_R.c:619: error: 'RApacheHandler' has no member named 'directive'
mod_R.c: In function 'ShowMessage':
mod_R.c:654: error: 'ptr_R_WriteConsoleEx' undeclared (first use in
this function)
mod_R.c: In function 'GetHandlerFromRequest':
mod_R.c:762: error: 'RApacheHandler' has no member named 'directive'
mod_R.c: In function 'TearDownRequest':
mod_R.c:803: warning: implicit declaration of function 'ParseEval'
mod_R.c:803: error: 'R_GlobalEnv' undeclared (first use in this
function)
mod_R.c:824: error: 'RApacheRequest' has no member named
'outputErrors'
mod_R.c:829: error: 'RApacheRequest' has no member named
'outputErrors'
mod_R.c:902: error: 'RApacheRequest' has no member named
'outputErrors'
mod_R.c: In function 'RApacheResponseError':
mod_R.c:912: error: 'RApacheRequest' has no member named
'outputErrors'
mod_R.c:917: error: 'RApacheRequest' has no member named
'outputErrors'
mod_R.c: In function 'RApacheError':
mod_R.c:941: error: 'RApacheRequest' has no member named
'outputErrors'
mod_R.c:946: error: 'RApacheRequest' has no member named
'outputErrors'
mod_R.c:949: error: 'RApacheRequest' has no member named 'errorPrefix'
mod_R.c:949: error: 'RApacheRequest' has no member named 'errorPrefix'
mod_R.c:950: error: 'RApacheRequest' has no member named 'errorSuffix'
mod_R.c:950: error: 'RApacheRequest' has no member named 'errorSuffix'
mod_R.c: In function 'init_R':
mod_R.c:997: error: 'R_SignalHandlers' undeclared (first use in this
function)
mod_R.c:1001: warning: implicit declaration of function
'Rf_initEmbeddedR'
mod_R.c:1004: error: 'R_Consolefile' undeclared (first use in this
function)
mod_R.c:1005: error: 'R_Outputfile' undeclared (first use in this
function)
mod_R.c:1006: error: 'ptr_R_Suicide' undeclared (first use in this
function)
mod_R.c:1007: error: 'ptr_R_ShowMessage' undeclared (first use in this
function)
mod_R.c:1008: error: 'ptr_R_WriteConsole' undeclared (first use in
this function)
mod_R.c:1009: error: 'ptr_R_WriteConsoleEx' undeclared (first use in
this function)
mod_R.c:1010: error: 'ptr_R_ReadConsole' undeclared (first use in this
function)
mod_R.c:1011: error: 'ptr_R_ResetConsole' undeclared (first use in
this function)
mod_R.c:1011: error: 'ptr_R_FlushConsole' undeclared (first use in
this function)
mod_R.c:1011: error: 'ptr_R_ClearerrConsole' undeclared (first use in
this function)
mod_R.c:1012: error: 'ptr_R_Busy' undeclared (first use in this
function)
mod_R.c:1013: error: 'ptr_R_CleanUp' undeclared (first use in this
function)
mod_R.c:1013: error: 'NoOpCleanUp' undeclared (first use in this
function)
mod_R.c:1014: error: 'ptr_R_ShowFiles' undeclared (first use in this
function)
mod_R.c:1015: error: 'ptr_R_ChooseFile' undeclared (first use in this
function)
mod_R.c:1016: error: 'ptr_R_EditFile' undeclared (first use in this
function)
mod_R.c:1017: error: 'ptr_R_loadhistory' undeclared (first use in this
function)
mod_R.c:1017: error: 'ptr_R_savehistory' undeclared (first use in this
function)
mod_R.c:1017: error: 'ptr_R_addhistory' undeclared (first use in this
function)
mod_R.c:1017: error: 'NoOpHistoryFun' undeclared (first use in this
function)
mod_R.c:1021: error: 'R_CStackLimit' undeclared (first use in this
function)
mod_R.c: In function 'PrintTraceback':
mod_R.c:1099: error: 'ptr_R_WriteConsoleEx' undeclared (first use in
this function)
mod_R.c:1100: error: 'R_GlobalEnv' undeclared (first use in this
function)
mod_R.c: In function 'InitTempDir':
mod_R.c:1113: error: 'R_TempDir' undeclared (first use in this
function)
mod_R.c: At top level:
mod_R.c:1122: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'NewLogical'
mod_R.c:1130: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'NewInteger'
mod_R.c:1138: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'NewEnv'
mod_R.c:1152: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'ParseText'
mod_R.c:1165: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'ParseEval'
mod_R.c:1179: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'EvalExprs'
mod_R.c:1205: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'CallFun1expr'
mod_R.c:1217: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'CallFun1str'
mod_R.c: In function 'PrepareFileExprs':
mod_R.c:1233: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1236: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1236: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1239: error: 'RApacheHandler' has no member named 'parsedFile'
mod_R.c:1239: error: 'RApacheHandler' has no member named 'parsedFile'
mod_R.c:1242: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1247: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1249: error: 'RApacheHandler' has no member named 'parsedFile'
mod_R.c:1253: error: 'RApacheParsedFile' has no member named 'mtime'
mod_R.c:1258: error: 'RApacheParsedFile' has no member named 'exprs'
mod_R.c:1258: warning: implicit declaration of function
'R_ReleaseObject'
mod_R.c:1258: error: 'RApacheParsedFile' has no member named 'exprs'
mod_R.c:1260: error: 'RApacheParsedFile' has no member named 'exprs'
mod_R.c:1260: warning: implicit declaration of function 'CallFun1str'
mod_R.c:1260: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1260: error: 'R_GlobalEnv' undeclared (first use in this
function)
mod_R.c:1264: error: 'RApacheParsedFile' has no member named 'exprs'
mod_R.c:1265: error: 'RApacheParsedFile' has no member named 'mtime'
mod_R.c: In function 'PrepareHandlerExpr':
mod_R.c:1287: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1288: warning: implicit declaration of function 'Calloc'
mod_R.c:1288: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1288: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1288: error: expected expression before 'char'
mod_R.c:1288: warning: assignment makes pointer from integer without a
cast
mod_R.c:1289: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1289: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1291: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1291: error: expected expression before 'char'
mod_R.c:1291: warning: assignment makes pointer from integer without a
cast
mod_R.c:1292: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1295: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1296: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1296: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1296: error: expected expression before 'char'
mod_R.c:1296: warning: assignment makes pointer from integer without a
cast
mod_R.c:1297: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1297: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1299: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1299: error: expected expression before 'char'
mod_R.c:1299: warning: assignment makes pointer from integer without a
cast
mod_R.c:1300: error: 'RApacheHandler' has no member named 'directive'
mod_R.c:1304: error: 'RApacheHandler' has no member named 'expr'
mod_R.c:1304: warning: implicit declaration of function 'ParseText'
mod_R.c:1305: warning: implicit declaration of function 'Free'
mod_R.c:1310: warning: implicit declaration of function 'defineVar'
mod_R.c:1310: warning: implicit declaration of function 'install'
mod_R.c:1310: warning: implicit declaration of function 'mkString'
mod_R.c:1310: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:1311: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:1311: error: 'RApacheHandler' has no member named 'envir'
mod_R.c:1313: error: 'RApacheHandler' has no member named 'expr'
mod_R.c: In function 'RefreshRApacheEnv':
mod_R.c:1326: error: 'SEXP' undeclared (first use in this function)
mod_R.c:1326: error: expected ';' before 't'
mod_R.c:1329: error: 't' undeclared (first use in this function)
mod_R.c:1329: warning: implicit declaration of function 'ENCLOS'
mod_R.c:1329: error: 'R_GlobalEnv' undeclared (first use in this
function)
mod_R.c:1329: error: 'R_BaseEnv' undeclared (first use in this
function)
mod_R.c:1330: error: 'MR_RApacheEnv' undeclared (first use in this
function)
mod_R.c:1344: warning: implicit declaration of function 'SET_ENCLOS'
mod_R.c: In function 'InitRApacheEnv':
mod_R.c:1362: error: 'MR_RApacheEnv' undeclared (first use in this
function)
mod_R.c:1362: error: 'R_GlobalEnv' undeclared (first use in this
function)
mod_R.c:1375: warning: implicit declaration of function 'NewInteger'
mod_R.c:1429: error: 'R_NilValue' undeclared (first use in this
function)
mod_R.c:1436: warning: implicit declaration of function
'R_LockEnvironment'
mod_R.c:1438: warning: implicit declaration of function
'R_unLockBinding'
mod_R.c: In function 'OnStartupCallback':
mod_R.c:1446: error: 'SEXP' undeclared (first use in this function)
mod_R.c:1446: error: expected ';' before 'val'
mod_R.c:1449: error: 'val' undeclared (first use in this function)
mod_R.c:1449: error: 'R_GlobalEnv' undeclared (first use in this
function)
mod_R.c: At top level:
mod_R.c:1459: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'MyfindFun'
mod_R.c: In function 'RApacheInfo':
mod_R.c:1482: error: 'SEXP' undeclared (first use in this function)
mod_R.c:1482: error: expected ';' before 'envir'
mod_R.c:1486: error: 'envir' undeclared (first use in this function)
mod_R.c: At top level:
mod_R.c:1596: error: expected specifier-qualifier-list before 'SEXP'
mod_R.c: In function 'TableCallback':
mod_R.c:1603: error: 'SEXP' undeclared (first use in this function)
mod_R.c:1603: error: expected ';' before 'value'
mod_R.c:1606: error: 'value' undeclared (first use in this function)
mod_R.c:1606: error: 'R_NilValue' undeclared (first use in this
function)
mod_R.c:1608: warning: implicit declaration of function
'NEW_CHARACTER'
mod_R.c:1609: warning: implicit declaration of function 'STRING_PTR'
mod_R.c:1609: error: subscripted value is neither array nor pointer
mod_R.c:1609: warning: implicit declaration of function 'mkChar'
mod_R.c:1612: error: 'struct TableCtx' has no member named 'names'
mod_R.c:1612: error: 'struct TableCtx' has no member named 'i'
mod_R.c:1613: warning: implicit declaration of function 'SET_ELEMENT'
mod_R.c:1613: error: 'struct TableCtx' has no member named 'list'
mod_R.c:1613: error: 'struct TableCtx' has no member named 'i'
mod_R.c:1614: error: 'struct TableCtx' has no member named 'i'
mod_R.c: At top level:
mod_R.c:1619: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'AprTableToList'
mod_R.c:1642: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_setHeader'
mod_R.c:1661: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_setContentType'
mod_R.c:1673: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_setCookie'
mod_R.c:1728: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'encode'
mod_R.c:1747: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'decode'
mod_R.c:1766: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_urlEnDecode'
mod_R.c:1791: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_RApacheInfo'
mod_R.c:1797: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_parseGet'
mod_R.c:1813: error: expected specifier-qualifier-list before 'SEXP'
mod_R.c: In function 'FileUploadsCallback':
mod_R.c:1824: error: 'SEXP' undeclared (first use in this function)
mod_R.c:1824: error: expected ';' before 'file_elem'
mod_R.c:1830: error: 'RApacheFileUploads' has no member named 'files'
mod_R.c:1830: error: 'RApacheFileUploads' has no member named 'i'
mod_R.c:1830: error: 'R_NilValue' undeclared (first use in this
function)
mod_R.c:1831: error: 'RApacheFileUploads' has no member named 'names'
mod_R.c:1831: error: 'RApacheFileUploads' has no member named 'i'
mod_R.c:1835: error: 'file_elem' undeclared (first use in this
function)
mod_R.c:1835: warning: implicit declaration of function 'NEW_LIST'
mod_R.c:1836: error: 'name_elem' undeclared (first use in this
function)
mod_R.c:1836: warning: implicit declaration of function 'NEW_STRING'
mod_R.c:1837: error: 'str1' undeclared (first use in this function)
mod_R.c:1838: error: 'str2' undeclared (first use in this function)
mod_R.c:1840: error: subscripted value is neither array nor pointer
mod_R.c:1841: error: subscripted value is neither array nor pointer
mod_R.c:1846: error: subscripted value is neither array nor pointer
mod_R.c:1847: error: subscripted value is neither array nor pointer
mod_R.c:1849: warning: implicit declaration of function 'SET_NAMES'
mod_R.c:1851: error: 'RApacheFileUploads' has no member named 'files'
mod_R.c:1851: error: 'RApacheFileUploads' has no member named 'i'
mod_R.c:1852: error: 'RApacheFileUploads' has no member named 'names'
mod_R.c:1852: error: 'RApacheFileUploads' has no member named 'i'
mod_R.c:1856: error: 'RApacheFileUploads' has no member named 'i'
mod_R.c: At top level:
mod_R.c:1861: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'parsePost'
mod_R.c:1932: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_parsePost'
mod_R.c:1934: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_parseFiles'
mod_R.c:1936: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_parseCookies'
mod_R.c:1960: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_getServer'
mod_R.c:2022: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_sendBin'
mod_R.c:2254: error: expected '=', ',', ';', 'asm' or '__attribute__'
before 'RApache_outputErrors'
mod_R.c: In function 'RegisterCallSymbols':
mod_R.c:2281: error: 'R_CallMethodDef' undeclared (first use in this
function)
mod_R.c:2281: error: expected ';' before 'callMethods'
mod_R.c:2296: warning: implicit declaration of function
'R_registerRoutines'
mod_R.c:2296: warning: implicit declaration of function
'R_getEmbeddingDllInfo'
mod_R.c:2296: error: 'callMethods' undeclared (first use in this
function)
apxs:Error: Command failed with rc=65536
.
make: *** [mod_R.so] Error 1

[Harlan Harris]

Sounds like the problem I had in this thread:
http://groups.google.com/group/rapache/browse_thread/thread/e75ca3e49293ae4b/

The solution is that you have to also install the libapreg2-devel
package, not just libapreg2.

-Harlan