Hi, I am trying to use random jungle to analyze GWAS data. the PED file generated with --recodeA

Hi, I constructed a randomForest model with 2 different classes (drug sensitive and drug resistant

Hi, I've been using randomJungle for both classification and regression but I'm having some

Hi everyone, my data are a numeric response variable, and categorical predictors (SNP genotypes).

Hi, I am trying to use jungle to construct a expression signature capable of predicting phenotype, in

Hi Jennifer, Sorry I did not reply sooner I had a busy day today, It's such a relief that

I am trying the -W option to adjust class weight for imbalanced data. As the details of the option

Hello. I am new to the linux world. I am trying to install RandomJungle on a Ubuntu 12.04 box to run

Hi all, I need a help on how to set the run parameters when the dataset contains both numerical and

Dear Allison, the random jungle algorithm uses the original imputation method by Breiman. Breiman

Hi, Did you try "--votes"? Am Freitag, 19. Oktober 2012 schrieb pitrolla : Hi, Is it

Dear libre.l...@gmail.com, I do not know if you realise, but your email was sent to the entire

After running randomjungle and getting a jungle.xml file I try to use it for prediction, but get an

Prediction of test data output only the response of individuals. The predict.randomForest() funciton

It seems the code from Sourceforge have been out of date for a time. I'd like build binary by

Dear Degroeve, please find my answer below your citation. > However, (and please correct me it I

Dear all, in the last months the RJ project dependencies and the team have changed. We regret the

The code in subversion is lacking BUILD/INSTALL instructions. I think it is also missing some

Dear Sir, I would like to download the source for the latest version of RJ but it appears that the

Reference: http://www.biomedcentral.com/1471-2105/10/78 On 1 Apr., 22:41, Daniel Schwarz <dafre...

The mtry value can be tuned using option -q. (see, rjungle --help)

How many trees did you grow and what data set did you analysed? Sent via BlackBerry from E-Plus From:

Hi! Looks good to me. It seems that the output of both processes (2 nodes) was put to the *.o file.

Hi! That is not supported. But it might be capable to implement it. Out putting the internal tree

Hi! The "raw score" is the raw importance score. Negative values are common. But you should

I have successfully compiled the C++ source available on this site, in the Download section. I had

Dear Daniel, thanks for the clarification. Best wishes, Anya On 5 Mrz., 22:29, Daniel Schwarz <

The options are suggested for feature selection. Cheers, Daniel On 5 Mrz., 22:25, Daniel Schwarz <

Dear Daniel, First of all thank you very much for this excellent tool. I and my colleagues find it