PDB ids for proteins under SCOP family

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PRASAD BAJAJ

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Nov 13, 2009, 9:31:07 PM11/13/09
to predict...@googlegroups.com
hi
i am new to this field.
so if anyone can tell me how i can get PDB ids for proteins under same SCOP family and wanted to know same for each family except doing it manually.
i would be really thankful if anyone can help me.
Thanks

mauricio arenas

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Nov 20, 2009, 10:16:50 PM11/20/09
to predict...@googlegroups.com, PRASAD BAJAJ
Hi Prasad,
you can do that using the advanced search from PDB data base and in choose a query type "Structure Features" and SCOP classification.

http://www.pdb.org/pdb/search/advSearch.do

cheers

Mauricio Arenas Salinas
Bioquimico
Fac. de Ingeniería
Escuela de Ing. en Bioinformática
Universidad de Talca, Chile.
cbsm.utalca.cl
(56)-71-201685


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