Groups
Groups
Sign in
Groups
Groups
popABC
Conversations
About
Send feedback
Help
Group path
popABC
Contact the owners and managers
1–30 of 88
Mark all as read
Report group
0 selected
Alfredo Ortiz
,
Joao Sollari Lopes
2
26/03/2024
problem in DIY ABC
his google group is for popABC, a software that was published in 2009. As far as I know, this is the
unread,
problem in DIY ABC
his google group is for popABC, a software that was published in 2009. As far as I know, this is the
26/03/2024
Kunal Arekar
, …
Joao Sollari Lopes
3
26/03/2024
diyABC - Error in Reference table generation
guys, this google group is for popABC, a software that was published in 2009. As far as I know, this
unread,
diyABC - Error in Reference table generation
guys, this google group is for popABC, a software that was published in 2009. As far as I know, this
26/03/2024
Arley Camargo
,
Joao Sollari Lopes
3
03/05/2022
nexus2table in mac
Thanks Joao for the "heads-up!" All the best, a ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
unread,
nexus2table in mac
Thanks Joao for the "heads-up!" All the best, a ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
03/05/2022
Oscar Huanel
,
Weeds
2
17/03/2022
error during estimaion of scenario confidence and type I and type II error (with return code 3)
Hi, this is a bit of a longshot but did you ever work out why you got this error Oscar? I am getting
unread,
error during estimaion of scenario confidence and type I and type II error (with return code 3)
Hi, this is a bit of a longshot but did you ever work out why you got this error Oscar? I am getting
17/03/2022
Alice Mouton
,
Joao Sollari Lopes
2
20/07/2020
DiYABC errror message
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else in the google groups can
unread,
DiYABC errror message
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else in the google groups can
20/07/2020
beli...@gmx.de
,
Joao Sollari Lopes
2
20/07/2020
Does DIYABC also consider positions that are NOT polymorphic? And how to convert Nexus/Fasta into Genepop?
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else in the google groups can
unread,
Does DIYABC also consider positions that are NOT polymorphic? And how to convert Nexus/Fasta into Genepop?
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else in the google groups can
20/07/2020
Federica Lucati
,
Joao Sollari Lopes
2
20/07/2020
DIYABC: Pre-evaluation of scenarios
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
unread,
DIYABC: Pre-evaluation of scenarios
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
20/07/2020
Federica Lucati
,
Joao Sollari Lopes
2
20/07/2020
DIYABC Pre-evaluation of scenarios: too many stars
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
unread,
DIYABC Pre-evaluation of scenarios: too many stars
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
20/07/2020
junchu peng
,
Joao Sollari Lopes
2
13/04/2019
DIYABC: Erreur dans readheaders().
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
unread,
DIYABC: Erreur dans readheaders().
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
13/04/2019
rea...@zju.edu.cn
,
Joao Sollari Lopes
2
13/04/2019
diyabc: input file with two kinds of data (RAD-SNPs, 20 ssrs)
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
unread,
diyabc: input file with two kinds of data (RAD-SNPs, 20 ssrs)
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
13/04/2019
Gustavo Tavares
,
Joao Sollari Lopes
2
25/11/2018
DIY ABC software and manual
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
unread,
DIY ABC software and manual
Hi, I'm afraid I don't know how to use DIY ABC. Maybe someone else can help you with that.
25/11/2018
Maried
02/04/2017
Topologies with more than five populations
Hi there! I'm using PopABC to infer demographic history of 8 natural populations. I have
unread,
Topologies with more than five populations
Hi there! I'm using PopABC to infer demographic history of 8 natural populations. I have
02/04/2017
Maried
02/04/2017
Topologies
Hi there! I'm using PopABC to infer demographic history of 8 natural populations. I have
unread,
Topologies
Hi there! I'm using PopABC to infer demographic history of 8 natural populations. I have
02/04/2017
Kritika Garg
, …
Kritika Garg
4
03/12/2016
help with setting up migration matrix
Dear Joao, Thank you for you help. I would like to extent the above model and add another event
unread,
help with setting up migration matrix
Dear Joao, Thank you for you help. I would like to extent the above model and add another event
03/12/2016
Miguel Camacho
15/01/2016
transformation of data
Hi, I have been reading in publications such as Lopes and Boessenkool 2010 two steps related to data
unread,
transformation of data
Hi, I have been reading in publications such as Lopes and Boessenkool 2010 two steps related to data
15/01/2016
Miguel Camacho
11/12/2015
generation times <1 year
Hi, I am working with rats, which have a generation time of 0,5 year. Whenever I try to create to
unread,
generation times <1 year
Hi, I am working with rats, which have a generation time of 0,5 year. Whenever I try to create to
11/12/2015
Luca Antoni
13/11/2015
problems running popABC for real data
Dear Dr. Lopes, I'm currently trying to use popABC on a real dataset which includes 4 populations
unread,
problems running popABC for real data
Dear Dr. Lopes, I'm currently trying to use popABC on a real dataset which includes 4 populations
13/11/2015
Balaji Chattopadhyay
,
Joao Sollari Lopes
2
14/03/2015
SNP
Hi Balaji, popABC deals with SNPs as sets of 0s and 1s. if you consider SNP's with only two
unread,
SNP
Hi Balaji, popABC deals with SNPs as sets of 0s and 1s. if you consider SNP's with only two
14/03/2015
Li
,
Joao Sollari Lopes
5
11/12/2014
model choice
Dear Joao, Thank you so much for all you have done. I performed the analyses using the old data
unread,
model choice
Dear Joao, Thank you so much for all you have done. I performed the analyses using the old data
11/12/2014
r.a....@exeter.ac.uk
, …
Joao Sollari Lopes
5
15/09/2014
Errors running R scripts
Thanks for that Paul. You are absolutely right. You should change "predict.locfit" for
unread,
Errors running R scripts
Thanks for that Paul. You are absolutely right. You should change "predict.locfit" for
15/09/2014
miguelcama...@gmail.com
,
Joao Sollari Lopes
2
09/09/2014
Problems with hitting distribution of real data
Hi Miguel, You should set some variation to the prior of the mutation rate something like normal(4e-
unread,
Problems with hitting distribution of real data
Hi Miguel, You should set some variation to the prior of the mutation rate something like normal(4e-
09/09/2014
Pooja Gupta
, …
Joao Sollari Lopes
4
01/08/2014
error in tev plot during regression step
Hi Federica, Ups, I forgot to attach the script. Here it goes in attachment. Also I meant no
unread,
error in tev plot during regression step
Hi Federica, Ups, I forgot to attach the script. Here it goes in attachment. Also I meant no
01/08/2014
francesc...@gmail.com
,
Joao Sollari Lopes
2
25/07/2014
error when using summdata
Hi Francesco, The problem is that there is a problem when calculating the number of summary
unread,
error when using summdata
Hi Francesco, The problem is that there is a problem when calculating the number of summary
25/07/2014
Thierry Gosselin
,
Joao Sollari Lopes
2
24/07/2014
error::incorrect number of digits in locus!
Hi Thierry, The trouble is that the genepop to table file converter was not designed for very many
unread,
error::incorrect number of digits in locus!
Hi Thierry, The trouble is that the genepop to table file converter was not designed for very many
24/07/2014
federica mattucci
,
Joao Sollari Lopes
2
23/07/2014
Error incurred plotting the rejection file in R
Hi Federica, The script you mention in your email is the one that performs the regression-step, not
unread,
Error incurred plotting the rejection file in R
Hi Federica, The script you mention in your email is the one that performs the regression-step, not
23/07/2014
federica mattucci
,
Joao Sollari Lopes
3
07/10/2013
How choose the topology with more than 5 populations
thank you very much!!! Federica
unread,
How choose the topology with more than 5 populations
thank you very much!!! Federica
07/10/2013
Sang Chul Choi
,
Joao Sollari Lopes
3
05/06/2013
A single population with population size change such as bottleneck?
Thank you! -SCC On Monday, May 27, 2013 5:38:13 AM UTC-8, Joao Sollari Lopes wrote: Hi SangChul, 1)
unread,
A single population with population size change such as bottleneck?
Thank you! -SCC On Monday, May 27, 2013 5:38:13 AM UTC-8, Joao Sollari Lopes wrote: Hi SangChul, 1)
05/06/2013
Aryn W
,
Joao Sollari Lopes
2
08/04/2013
Converting multiple loci from .nex to .len
Hi Aryn, I am afraid the .nex to .len file can only deal with data with 1 locus. I guess the best bet
unread,
Converting multiple loci from .nex to .len
Hi Aryn, I am afraid the .nex to .len file can only deal with data with 1 locus. I guess the best bet
08/04/2013
Ane Hahn
,
Joao Sollari Lopes
4
19/02/2013
times not monotonic increasing
Hi Anelise, Would it be ok if you attach the prior file you created so that I can take a look? Joao
unread,
times not monotonic increasing
Hi Anelise, Would it be ok if you attach the prior file you created so that I can take a look? Joao
19/02/2013
Kritika Garg
,
Joao Sollari Lopes
2
16/01/2013
help with posteriors
Hi Kritika, Regarding question 1), what is saved in the .dat file are the values taken by the hyper
unread,
help with posteriors
Hi Kritika, Regarding question 1), what is saved in the .dat file are the values taken by the hyper
16/01/2013
