Phyre

Hi The best I can do at the moment is to suggest RoseTTAfoldDNA as described in this paper from the

Hi folks Over the last couple of weeks, jobs have been failing unexpectedly - I've found that if

Hi folks We're having to replace the machine on which the Phyre2 web pages run. The service

Hi folks We have decided to invest in a new server rather than try to upgrade the current hardware;

Hi folks Our webserver is becoming increasingly difficult to maintain because it has an old operating

Unfortunately, this wasn't just the PDF representation - it was for the disordered regions

Hi folks Unfortunately while adding "improvements" to Phyre2, I broke the job description

In response to a user request, I have added a couple of small features to the Phyre2 home page. They

Sorry about the delay in replying - I don't look at the Google group very often. On the results

The observant amongst you may have noticed that I have been testing Phyre2 on a set of new servers;

How do I get access to the one to one threading window

Hi Harry, Hope you're well. I submitted a few sequences into Phyre2 intensive mode which are now

Hi folks Unfortunately, our attempts to fix ongoing problems with our disks have failed to fix all

Thank you all experts Regards S krupanidhi On Wed, 21 Sep, 2022, 7:59 pm Powell, Harold, <harold.

We had a small server issue this morning - should all be sorted out now.

Hi folks I *think* that things will be working again shortly - just running some final tests, but if

Hi folks Sorry about this - my efforts to get our new nodes up and running resulted in a huge

Hi We seem to be having a lot of trouble with our computing nodes crashing today - I've tried to

Hi Our IT people inadvertently removed Phyre2 from the list of "people" allowed to send

Hi Priya I think I've sorted out this problem now - I've run several identical jobs and get

What I should add is that in my in-house testing I sometimes get identical results using both old and

Hi Justine Sorry about the delayed reply! Q1 - yes, you can use the one-to-one threading method

Following a request, I've added a small new feature to the "Template information" - RHS

Hi folks I've just updated the software for modelling the sidechains - in spite of extensive

You're welcome On Wed, Jul 7, 2021 at 10:30 AM Laurent Corcos <laurent...@gmail.com>

Hi The observant amongst you will have noticed that the server nodes that Phyre2 runs on occasionally

Dear Dr. Lawrence, First of all, thank you for developing this useful tool and leave it publicly

Hello, I just submitted a job to Phyre2. Although the structure is fine the alignment is a bit off. I

It's been pointed out to me off-board that if you sign in and go to "expert" mode, you

I submitted a contiguous AA sequence of about 400AA in single letter format. The model that was