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Getting Started With GGobi    

Windows:

 

The easiest way to get started with GGobi is on Windows. First, you need to install R. See

 

http://groups.google.com/group/pdx-visualization/web/getting-started-with-the-r-programming-language

 

for the instructions. I'm going to assume you're not behind a firewall. If you are, you will need to ask your IT / firewall administrators for help and permission to do this.

 

Start up R in Windows. If you're on Vista, you'll probably want to use the "Run as Administrator" option. Then type at the ">" prompt:

 

source("http://www.ggobi.org/downloads/install.r")

 

It will ask you if you want to install "GTK+" and "GGobi". Answer "yes" to both. That's all you need to do.

 

 

Linux:

 

On Ubuntu or Debian, you should be able to do "apt-get install ggobi" and get it installed. On Fedora, you should be able to type "yum install ggobi" and get it installed. If you have either of these, please try it and let me know if it doesn't work. When you're done, you should have the latest version, 2.1.8, installed.

 

On openSUSE, the situation is a little more complicated.  There is a pre-built package available in the openSUSE repositories, but it's a slightly older version (2.1.7) with a very annoying bug having to do with saving GGobi results in a format suitable for presentation graphics. As a result, I build GGobi from source on my openSUSE machines, and I recommend you do the same. If anybody else has openSUSE, let me know and I'll send you the build script I use. The instructions for building from source are at

 

http://ggobi.org/downloads/#linux

 

if you want to try it without help. You'll need to install compilers, "make", etc., and header files for the libraries that GGobi uses.

 

 

 

MacOS X:

 

Again, I have never done this, so please try it and let me know whether it works or not.

 

http://ggobi.org/downloads/#mac

 

 

Testing on a Social Network dataset:

 

Assuming you do get GGobi installed, start it up. You should get a control panel. Go into the "File" menu and open the "snetwork.xml" data file that comes with the package. The "open" menu should browse to the right directory. If it doesn't, let me know and I'll help you figure out where it is. Now go into the "Tools" menu. At the bottom, you should see an entry called "ggvis (MDS)". Go over to the "Run" tab and check the "Run MDS" box. A window should open up showing the "social network". Now in the "Edges" menu select "attach edge set (contacts)". It should "connect the dots". Go back to the main GGobi control panel and select "Move Points" in the "Interaction" menu. Now you should be able to mouse over a node and see the person's name! Drag a point somewhere and the MDS code will move it back where you found it! Uncheck the "Run MDS" box and it should let you drag the nodes around without restoring them to their computed positions.

 

There's another, probably better, version of this dataset at

 

http://ggobi.org/book/data/snetwork.xml

 

Here's a brief paper on the subject and a brief slide presentation:


http://www.ci.tuwien.ac.at/Conferences/DSC-2003/Proceedings/SwayneEtAl.pdf

http://www.galaxy.gmu.edu/interface/I03/I2003Proceedings/SwayneDeborah/SwayneDeborah.presentation.pdf


If you want to import one of your own social networks into XML, the main XML format documentation is at

 

http://ggobi.org/docs/xml.pdf

 

The actual manual is at

 

http://ggobi.org/docs/manual.pdf

 

Version: 
Latest 3 messages about this page (7 total) - view full discussion
Mar 27 2009 by M. Edward (Ed) Borasky
I've never used it on a Mac. You might try installing GGobi from
source too -- that might tell you what if any dependencies are
missing. There's an XML library for sure that's required.

http://ggobi.org/downloads/ggobi-2.1.8.tar.bz2





--
M. Edward (Ed) Borasky
http://www.linkedin.com/in/edborasky
Mar 27 2009 by Thomas
Greetings. I'm on an Apple G5 running OS X 10.5. I used macport to
install the gtk2 libray and made a link to it at where ggobi says it
is looking for it. I intstalled ggobi, seemingly w/o error, but when I
launch it I get the error message
.. execution error: X11 got an error: APpple Event timed out. (-1712)
Mar 27 2009 by M. Edward (Ed) Borasky
Thanks for testing this stuff! By the way, the datasets described in
the book need to be downloaded from the GGobi web site
http://ggobi.org/book/. Some of them are distributed with the package
the same as they are on the web site, some are distributed but are
different, and some aren't in the distribution at all! I am planning
4 more messages »
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