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tolot27  
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 More options Apr 24 2012, 4:16 am
From: tolot27 <math...@walter.gd>
Date: Tue, 24 Apr 2012 01:16:18 -0700 (PDT)
Local: Tues, Apr 24 2012 4:16 am
Subject: numerical or footnote citations

Hi,

I'm using Pandoc 1.9.2 with Windows and Linux and try to get different
citation styles working. But whatever I do, the html (or docx) output looks
always the same. I've just a very simple markdown file containing only the
citation and reference section like this:

Bacterial evolution [@Woese1987]
# References

Then I have a bib file containing the above entry only.

I use the the following command to "compile" the markdown file to html:

pandoc test.md --bibliog test.bib -csl nature.csl -o test.html

I tried different CSL (nature, geopolitics, BMC Bioinformatics, ama, etc)
but the resulting html (or docx) file always looks like following:

Bacterial evolution (Woese 1987)
*References*

Woese, C. R. 1987. “Bacterial evolution.” *Microbiol Rev* 51 (jun): 221–271.

What do I miss here? If I look at the html sources I can see that the CSL
file is merged into the html file. Why?

--
Kind regards,
Mathias


 
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andrea rossato  
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 More options Apr 25 2012, 5:07 am
From: andrea rossato <andrea.ross...@gmail.com>
Date: Wed, 25 Apr 2012 11:07:12 +0200
Local: Wed, Apr 25 2012 5:07 am
Subject: Re: numerical or footnote citations

Instead of

    pandoc test.md --bibliog test.bib -csl nature.csl -o test.html

you should write:

    pandoc test.md --bibliog test.bib --csl nature.csl -o test.html

(notice the '--csl' correction).

If you omit a dash 'nature.csl' will be treated as some markdown source:
this is the reason why you see the CSL file merged into the html file.

Hope this helps.

Best,
Andrea


 
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tolot27  
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 More options Apr 26 2012, 6:57 am
From: tolot27 <math...@walter.gd>
Date: Thu, 26 Apr 2012 03:57:33 -0700 (PDT)
Local: Thurs, Apr 26 2012 6:57 am
Subject: Re: numerical or footnote citations

Hi Andrea,

the second dash did it. Thanks! :-)

--
Kind regards,
Mathias


 
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Walter, Mathias  
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 More options Apr 24 2012, 2:08 pm
From: "Walter, Mathias" <math...@walter.gd>
Date: Tue, 24 Apr 2012 20:08:55 +0200
Local: Tues, Apr 24 2012 2:08 pm
Subject: numerical or footnote citations
Hi,

I'm using Pandoc 1.9.2 with Windows and Linux and try to get different
citation styles working. But whatever I do, the html (or docx) output
looks always the same.

Just a very simple markdown file containing only the citation and
reference section like this:

Bacterial evolution [@Woese1987]

# References

The Bibtex file only contains an article entry. Then I "compile" the
markdown file with the following command: pandoc -s test.md
--bibliography test.bib -csl nature.csl -o test.html

The output always looks like following, regardless of the CSL I use. I
tried nature, ama, geopolitics, BMC Bioinformatics, etc.

Bacterial evolution (Woese 1987)

References

Woese, C. R. 1987. “Bacterial evolution.” Microbiol Rev 51 (jun): 221–271.

What do I miss?

--
Kind regards,
Mathias


 
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