OBO-Edit Developers Group

Hallo, the problem with the missing output was, that I changed in my own log4j.properties the log

Sorry, I didn't realize these mailing lists for the OBO-Edit working group existed. Can someone

Hi Nomi, Thanks for tracing this and implementing the check. No idea how the error crept in to the

Hi Harold, Thanks for sending goche.obo and your logfile. I am still unable to reproduce the problem;

Good news: Amina has fixed this Graph Viewer bug in OBO-Edit, so Phenote will now be able to show

Hi Tim Sorry for the delayed response. Unfortunately, the term "property" is ambiguous

OBO-Edit and associated jars should be up-to-date now. Thanks, Amina On 9/17/10 10:33 AM, Nomi Harris

I have commenced a java implementation of the 1.4 spec[*]. Even though the spec needs work, I find

No, I have OBO-Edit using 1600M of memory--that wasn't the problem. The problem turns out to be

The exception seems to originate with the Graph Viewer. The latest OBO-Edit throws this exception

Preparing to run unit tests for oboedit... svn updating OBO... svn updating oboedit... Rebuilding...

Preparing to run unit tests for obo... svn updating OBO... Rebuilding... Running 54 or so tests (some

Preparing to run unit tests for obo... svn updating OBO... Rebuilding... Running 54 or so tests (some

Preparing to run unit tests for obo... svn updating OBO... Rebuilding... Running 54 or so tests (some

Preparing to run unit tests for oboedit... svn updating OBO... svn updating oboedit... Rebuilding...

Preparing to run unit tests for oboedit... svn updating OBO... svn updating oboedit... Rebuilding...

Thanks for pointing that out Chris. I've removed the discrepancy. allowdangling will be default

On Apr 28, 2010, at 2:49 AM, Thomas Kappler wrote: > Hi again, > > I'd like to parse

The OBD API provides a bridge to the OE object model and a RESTful interface See http://www.

On Apr 23, 1:39 am, Chris Mungall <c...@berkeleybop.org> wrote: > See:http://wiki.

Hey, thanks so much for fixing it, Jim! Now the tables look nice again. Yesterday I had tried

Preparing to run unit tests for obo... svn updating OBO... Rebuilding... Running 54 or so tests (some

Preparing to run unit tests for obo... svn updating OBO... Rebuilding... Running 54 or so tests (some

Preparing to run unit tests for oboedit... svn updating OBO... svn updating oboedit... Rebuilding...

def. I've fixed the docs, thanks On Apr 6, 2010, at 7:47 AM, Thomas Wächter wrote: > Hello,

Preparing to run unit tests for obo... svn updating OBO... Rebuilding... Running 54 or so tests (some

Preparing to run unit tests for oboedit... svn updating OBO... svn updating oboedit... Rebuilding...

Preparing to run unit tests for obo... svn updating OBO... Rebuilding... Running 54 or so tests (some

Preparing to run unit tests for oboedit... svn updating OBO... svn updating oboedit... Rebuilding...

This is definitely a phenote build path issue again. One way to test is to remove the bbop, obo and