Groups
Sign in
Groups
NiPy Users
Conversations
Labels
About
Send feedback
Help
NiPy Users
1–30 of 531
Mark all as read
Report group
0 selected
Bill Ulrich
,
Satrajit Ghosh
5
11/10/14
Rapidart error
Ha - I noticed that the forums were moving moments after hitting 'Post'. Thanks, Bill
unread,
ArtifactDetect
nibabel
rapidart
Rapidart error
Ha - I noticed that the forums were moving moments after hitting 'Post'. Thanks, Bill
11/10/14
Satrajit Ghosh
11/6/14
moving QA to neurostars
dear folks, please post future nipype related questions at neurostars.org or on github issues. we
unread,
moving QA to neurostars
dear folks, please post future nipype related questions at neurostars.org or on github issues. we
11/6/14
Дмитро Бєлєвцов
,
Chris Filo Gorgolewski
3
10/27/14
[nipype] custom location for temporary files
Wow, neat system. Thanks On Sunday, October 26, 2014 7:23:06 PM UTC+1, Chris Filo Gorgolewski wrote:
unread,
nipype
workflow
[nipype] custom location for temporary files
Wow, neat system. Thanks On Sunday, October 26, 2014 7:23:06 PM UTC+1, Chris Filo Gorgolewski wrote:
10/27/14
Chris Filo Gorgolewski
, …
Erik Ziegler
3
10/17/14
[nipype] Software using or supporting Nipype
And this: cyclotronresearchcentre.github.io/forward/ On Thu, Oct 16, 2014 at 5:05 AM, Ariel Rokem
unread,
[nipype] Software using or supporting Nipype
And this: cyclotronresearchcentre.github.io/forward/ On Thu, Oct 16, 2014 at 5:05 AM, Ariel Rokem
10/17/14
Chris Filo Gorgolewski
10/16/14
Nipype 0.10.0 release
Dear all, I'm delighted to announce a brand new release of Nipype - a pipelining and interfacing
unread,
Nipype 0.10.0 release
Dear all, I'm delighted to announce a brand new release of Nipype - a pipelining and interfacing
10/16/14
Dan
,
Satrajit Ghosh
10
10/16/14
nipype - sometimes hangs on MatlabCommands
OK, thanks for the tips Satra. On Wed, Oct 15, 2014 at 1:24 PM, Satrajit Ghosh <sa...@mit.edu>
unread,
error
nipype
spm
nipype - sometimes hangs on MatlabCommands
OK, thanks for the tips Satra. On Wed, Oct 15, 2014 at 1:24 PM, Satrajit Ghosh <sa...@mit.edu>
10/16/14
CL
,
Satrajit Ghosh
5
10/16/14
FSL & Nipype IOError
Thank you for the assistance, I determined yesterday that iPython and Spyder were using a different
unread,
environmental
fsl
issue
neurodebian
nipype
FSL & Nipype IOError
Thank you for the assistance, I determined yesterday that iPython and Spyder were using a different
10/16/14
Etienne B. Roesch
10/10/14
Method development for coupled EEG-fMRI (1x Full EPSRC studentship)
Method development for coupled EEG-fMRI (1x Full EPSRC studentship) The goal of the project is to
unread,
Method development for coupled EEG-fMRI (1x Full EPSRC studentship)
Method development for coupled EEG-fMRI (1x Full EPSRC studentship) The goal of the project is to
10/10/14
Дмитро Бєлєвцов
, …
Chris Filo Gorgolewski
7
10/8/14
Machine learning capabilities and the Function Interface
Oh, thanks, I see now. The problem was that I was defining a class inside the function definition,
unread,
nipype
workflows
Machine learning capabilities and the Function Interface
Oh, thanks, I see now. The problem was that I was defining a class inside the function definition,
10/8/14
T. Dalton Combs
10/7/14
FSL FLAMEO tstats
One of the outputs of FLAMEO is 'tstats' what do the values in this image mean? The appear to
unread,
FLAMEO
fsl
nipype
FSL FLAMEO tstats
One of the outputs of FLAMEO is 'tstats' what do the values in this image mean? The appear to
10/7/14
Satrajit Ghosh
, …
matthew garlinghouse
6
9/29/14
[nipype] sprint irc channel
Hello Satrajit, I should have known ;).. OK, I will work on that. In the mean time I have opted to
unread,
[nipype] sprint irc channel
Hello Satrajit, I should have known ;).. OK, I will work on that. In the mean time I have opted to
9/29/14
Leemon Albert
,
Satrajit Ghosh
4
9/27/14
A 3dSkullStrip issue on Nipype 0.9.2
hi leemon, that error might be related to ssh-ing in to a requirement in afni to have a display. you
unread,
A 3dSkullStrip issue on Nipype 0.9.2
hi leemon, that error might be related to ssh-ing in to a requirement in afni to have a display. you
9/27/14
thomas.nickson
,
Satrajit Ghosh
3
9/24/14
Mapnode over multiple values for DCM converison
Hi Satra, I managed to solve this by using a synchronised iterable list in the identity interface!
unread,
MapNode
datagrabber
datasink
nifti
nipype
Mapnode over multiple values for DCM converison
Hi Satra, I managed to solve this by using a synchronised iterable list in the identity interface!
9/24/14
parnesh...@gmail.com
,
Satrajit Ghosh
3
9/23/14
nipype and fsl_sub
Thanks. I found out that this particular cluster had a modified fsl_sub for PBS/Torque that did not
unread,
cluster
fsl
fsl_sub
nipype
nipype and fsl_sub
Thanks. I found out that this particular cluster had a modified fsl_sub for PBS/Torque that did not
9/23/14
parnesh...@gmail.com
,
Satrajit Ghosh
3
9/23/14
Multiple versions of SPM
Ah I see, I was setting the paths in matlab. Thanks. On Wednesday, September 24, 2014 12:09:14 AM UTC
unread,
spm
Multiple versions of SPM
Ah I see, I was setting the paths in matlab. Thanks. On Wednesday, September 24, 2014 12:09:14 AM UTC
9/23/14
Gael Varoquaux
9/22/14
Hiring a NeuroImaging Engineer mine large functional-connectivity databases
Dear colleagues and friend, Please find the following job posting:
unread,
Hiring a NeuroImaging Engineer mine large functional-connectivity databases
Dear colleagues and friend, Please find the following job posting:
9/22/14
Cristian Vazquez
,
Satrajit Ghosh
2
9/9/14
Nipype and ssh
hi cristian, you need to read the ipython help on how to setup ipython over ssh. http://ipython.org/
unread,
nipype
plugin
ssh
Nipype and ssh
hi cristian, you need to read the ipython help on how to setup ipython over ssh. http://ipython.org/
9/9/14
Johannes Bathelt
, …
Erik Ziegler
9
9/9/14
Problems with dMRI_connectivity_advanced
Hey, That's a bit weird indeed. The parcellate interface definitely does have an ROI file output.
unread,
error
nipype
Problems with dMRI_connectivity_advanced
Hey, That's a bit weird indeed. The parcellate interface definitely does have an ROI file output.
9/9/14
Kai Schlamp
, …
bbf
4
9/8/14
[NiBabel] Loading large 4D NIfTI file -> MemoryError
Hi - I just ran into the same problem, and was wondering if there had been a more thorough solution
unread,
nibabel
[NiBabel] Loading large 4D NIfTI file -> MemoryError
Hi - I just ran into the same problem, and was wondering if there had been a more thorough solution
9/8/14
Yasin Yazıcı
,
Satrajit Ghosh
5
9/8/14
fslchfiletype
replace this line: if not isdefined(outputs['out_file']): outputs['out_file'] = self.
unread,
filetype
fsl
fslchfiletype
replace this line: if not isdefined(outputs['out_file']): outputs['out_file'] = self.
9/8/14
Chris Filo Gorgolewski
8/8/14
Postdoc position in Neuroanatomy and Connectivity Lab, Max Planck Institute
One of the most exciting labs I know is looking for a postdoc. I've been working there for two
unread,
Postdoc position in Neuroanatomy and Connectivity Lab, Max Planck Institute
One of the most exciting labs I know is looking for a postdoc. I've been working there for two
8/8/14
Arman Eshaghi
,
Erik Ziegler
2
7/30/14
Intro to NITRC Computational Environment
For what it's worth, the ULg quote was related to our recent paper on fiber track density in
unread,
Advertisement
Intro to NITRC Computational Environment
For what it's worth, the ULg quote was related to our recent paper on fiber track density in
7/30/14
Yasin Yazıcı
7/29/14
Mipav interface via JIST
Hi, I'm trying to interface with mipav via JIST. The command line that I want to implement is
unread,
CommandLine
JIST
interface
mipav
Mipav interface via JIST
Hi, I'm trying to interface with mipav via JIST. The command line that I want to implement is
7/29/14
Cris Lanting
,
Satrajit Ghosh
6
7/27/14
ANTs registration (rigid) - *InverseWarp.nii.gz not found
Thanks. Cheers, Cris
unread,
ants
registration
ANTs registration (rigid) - *InverseWarp.nii.gz not found
Thanks. Cheers, Cris
7/27/14
Oscar Esteban
,
Satrajit Ghosh
6
7/24/14
Workflow iterating on internal workflow
hi oscar, do send a PR. this comparative tool is going to be quite useful for persistent evaluations.
unread,
feature-request
nipype
workflow
Workflow iterating on internal workflow
hi oscar, do send a PR. this comparative tool is going to be quite useful for persistent evaluations.
7/24/14
Horea Christian
,
Satrajit Ghosh
4
7/22/14
SPM Dartel Tutorial - did it work? what now?
So where does the data come from? How can I check whether I am seeing what I am supposed to be seeing
unread,
Tutorial
nipype
spm
SPM Dartel Tutorial - did it work? what now?
So where does the data come from? How can I check whether I am seeing what I am supposed to be seeing
7/22/14
Dave W
, …
Johnson, Hans J
5
7/22/14
SGEGraph job dependencies
Nipype Users, We found a serious bug/problem with using the SGE graph based job submissions. There is
unread,
SGEGraph
sge
SGEGraph job dependencies
Nipype Users, We found a serious bug/problem with using the SGE graph based job submissions. There is
7/22/14
Helmet Karim
,
Satrajit Ghosh
7
7/22/14
NewSegment and Workflows
Satra, So I resolved the issue. So when I was defining NewSegment I was doing the following: from
unread,
NewSegment
nipype
outputfiles
spm
workflow
NewSegment and Workflows
Satra, So I resolved the issue. So when I was defining NewSegment I was doing the following: from
7/22/14
Arman Eshaghi
,
Satrajit Ghosh
2
7/20/14
[NiPype] Python 3 compatibility
hi arman, the primary piece, moving away from traits, is the work being done here: https://github.com
unread,
nipype
[NiPype] Python 3 compatibility
hi arman, the primary piece, moving away from traits, is the work being done here: https://github.com
7/20/14
parnesh...@gmail.com
,
Satrajit Ghosh
4
7/19/14
Worflows failing on provenance collection
yes. a diff with the current version should show the changes. cheers, satra On Sat, Jul 19, 2014 at 7
unread,
provenance
Worflows failing on provenance collection
yes. a diff with the current version should show the changes. cheers, satra On Sat, Jul 19, 2014 at 7
7/19/14