Hi Erez,
The three config servers are not a replica set, they are three independent mongod servers. All three are used by mongos processes.
When you take one of them down, the other config servers will become read-only - your sharded cluster will continue to operate, but no chunk splitting or balancing will happen (in other words, the sharding configuration becomes read-only, not your data).
This means that when you restore the data to hostA and start it again, it will not be "behind" the other two config servers (since those were read-only during the maintenance window) and it will not need to "catch up".
Once there are three config servers again, the sharded cluster will be able to resume splitting and balancing as needed.
Asya