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Qianqian Fang
,
Jiayu Chen
2
12/22/24
Re: [mcx-users] Questions when setting cfg.outputtype='length'
Sorry for bringing up a bad question. After sending the question, I realized what the problem was and
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Re: [mcx-users] Questions when setting cfg.outputtype='length'
Sorry for bringing up a bad question. After sending the question, I realized what the problem was and
12/22/24
Jiayu Chen
,
Qianqian Fang
3
12/22/24
How to get pathlength and trajectories of each photon?
Sorry for the late replay. Went out a while ago. This really solved my problem! 👍 Thank you very much
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How to get pathlength and trajectories of each photon?
Sorry for the late replay. Went out a while ago. This really solved my problem! 👍 Thank you very much
12/22/24
Matthew S
,
Fang, Qianqian
3
12/17/24
Zeros in photon sharing patterns
Hi Dr. Fang, Yes, generally I was trying to determine how similar the results between photon-sharing
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Zeros in photon sharing patterns
Hi Dr. Fang, Yes, generally I was trying to determine how similar the results between photon-sharing
12/17/24
Robin van Zutphen
, …
Matthew S
12
12/17/24
Potential speed increase
Hi again Dr. Fang, My apologies for not replying sooner, but I wanted to thank you for the fix. I
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Potential speed increase
Hi again Dr. Fang, My apologies for not replying sooner, but I wanted to thank you for the fix. I
12/17/24
ermiascachi kassahun
, …
Qianqian Fang
4
12/15/24
Re: [mcx-users] request for help
hi Erimias when I run the script you provided using the latest version of mcxlab, mcxpreview plots
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Re: [mcx-users] request for help
hi Erimias when I run the script you provided using the latest version of mcxlab, mcxpreview plots
12/15/24
Robin van Zutphen
,
Fang, Qianqian
3
12/8/24
Minor question invcdf definition
Sorry, the first source code link should have been https://github.com/fangq/mcx/blob/v2024.2/src/
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Minor question invcdf definition
Sorry, the first source code link should have been https://github.com/fangq/mcx/blob/v2024.2/src/
12/8/24
Jessica Lund
, …
Ernesto Pini
8
12/4/24
Converting between 'energy' and 'flux' outputs
Thank you! On Tuesday, November 19, 2024 at 12:28:17 PM UTC-5 Fang, Qianqian wrote: Jessica, I also
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Converting between 'energy' and 'flux' outputs
Thank you! On Tuesday, November 19, 2024 at 12:28:17 PM UTC-5 Fang, Qianqian wrote: Jessica, I also
12/4/24
Thomas Rialan
, …
Fang, Qianqian
4
12/2/24
two questions on replaydet in mcxlab
Hi Thomas, I back traced this behavior to this commit https://github.com/fangq/mcx/issues/217 After
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two questions on replaydet in mcxlab
Hi Thomas, I back traced this behavior to this commit https://github.com/fangq/mcx/issues/217 After
12/2/24
ww w
,
Fang, Qianqian
2
12/1/24
calculation of pathlengths
Is there any problem with this result? what kind of DPF values were you expecting? One quick note
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calculation of pathlengths
Is there any problem with this result? what kind of DPF values were you expecting? One quick note
12/1/24
ermiascachi kassahun
,
Fang, Qianqian
2
11/21/24
request for help
hi Erimias, This error is because of missing dlls. To see what dll is missing, you need to download,
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request for help
hi Erimias, This error is because of missing dlls. To see what dll is missing, you need to download,
11/21/24
Jiayu Chen
,
Fang, Qianqian
3
11/20/24
Cylinder set issue in nightly build MCX
Hi Dr.Fang Thanks for your kind reply! Your advice always helps us improving our simulation! Looking
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Cylinder set issue in nightly build MCX
Hi Dr.Fang Thanks for your kind reply! Your advice always helps us improving our simulation! Looking
11/20/24
Thomas Rialan
,
Fang, Qianqian
4
11/19/24
segmentation violation error at low timestep, but GPU memory not at full utilisation
Hi Thomas, please try this alternative link https://colab.research.google.com/drive/
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segmentation violation error at low timestep, but GPU memory not at full utilisation
Hi Thomas, please try this alternative link https://colab.research.google.com/drive/
11/19/24
ermiascachi kassahun
,
Fang, Qianqian
3
11/14/24
request for help
Thank You very much Dr.Fang for your sharing knowledge and good ideas. On Wed, Nov 13, 2024 at 2:31
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request for help
Thank You very much Dr.Fang for your sharing knowledge and good ideas. On Wed, Nov 13, 2024 at 2:31
11/14/24
陈嘉宇
,
Fang, Qianqian
7
11/14/24
How to build a ring detector in MCX? And some basic questions.
Hi Dr. Fang Thanks for your working on our needs! I will try this new feature! Have a nice day! And
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How to build a ring detector in MCX? And some basic questions.
Hi Dr. Fang Thanks for your working on our needs! I will try this new feature! Have a nice day! And
11/14/24
Carmel Auerbach
,
Fang, Qianqian
2
11/6/24
Help getting started with colin 27 simulations
Please post specific error messages related to the issue you encountered, including the version of
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Help getting started with colin 27 simulations
Please post specific error messages related to the issue you encountered, including the version of
11/6/24
IRENE
, …
Fang, Qianqian
5
11/5/24
Replay failed
Hi Andrea, cmake for mmc-trinity binaries are now fixed, see https://github.com/fangq/mmc/issues/105
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Replay failed
Hi Andrea, cmake for mmc-trinity binaries are now fixed, see https://github.com/fangq/mmc/issues/105
11/5/24
Alex Qiu
,
Fang, Qianqian
2
11/3/24
Is MCX Cloud supposed to be able to run the built-in simulations?
Hi Alex, Sorry for the long delay in getting back to you - this is a known issue. At some point in
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Is MCX Cloud supposed to be able to run the built-in simulations?
Hi Alex, Sorry for the long delay in getting back to you - this is a known issue. At some point in
11/3/24
SKYU
,
Fang, Qianqian
2
11/3/24
What is the maximum number of tissues??
MCX supports continuously varying media that is defined voxel by voxel. Please see this demo script
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What is the maximum number of tissues??
MCX supports continuously varying media that is defined voxel by voxel. Please see this demo script
11/3/24
Henry Liu
,
Fang, Qianqian
2
11/3/24
Simulation of Light Frequency
hi Henry, mcx currently does not directly run forward simulation of frequency-modulated light, it can
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Simulation of Light Frequency
hi Henry, mcx currently does not directly run forward simulation of frequency-modulated light, it can
11/3/24
Lei Fu
,
Qianqian Fang
2
10/24/24
Error: can't open output folder in MCX studio
hi Lei, you will have to run a simulation before the output folder is created - if the execution was
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Error: can't open output folder in MCX studio
hi Lei, you will have to run a simulation before the output folder is created - if the execution was
10/24/24
刘毅泽
, …
Qianqian Fang
4
10/24/24
Problem of opening files but can not load shapes
what you want to export to matlab? the simulation input file or output file? either way, in matlab,
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Problem of opening files but can not load shapes
what you want to export to matlab? the simulation input file or output file? either way, in matlab,
10/24/24
Dominic Hill
,
Qianqian Fang
5
10/9/24
Running MCX with a custom volume file - modifying the Colin27 template
Oh great! Many thanks for your help. I tried casting `data_dict.astype(np.uint16)` (I need more than
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Running MCX with a custom volume file - modifying the Colin27 template
Oh great! Many thanks for your help. I tried casting `data_dict.astype(np.uint16)` (I need more than
10/9/24
Brighten Pan
,
Qianqian Fang
5
10/9/24
Reduced Simulation Speed in MCXlab
from what you just described, I feel this is very likely caused by your OS/driver change instead of
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Reduced Simulation Speed in MCXlab
from what you just described, I feel this is very likely caused by your OS/driver change instead of
10/9/24
Zijian Deng
, …
Qianqian Fang
9
9/16/24
Simulation of photon propagation within digimouse
Dear Dr. Fang and Pauliina, Thanks so much for your valuable comments! I was assuming the unit for
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Simulation of photon propagation within digimouse
Dear Dr. Fang and Pauliina, Thanks so much for your valuable comments! I was assuming the unit for
9/16/24
Zr S
9/11/24
Simulation of bessel beam
Dear Dr. Fang, I am simulating the process of illuminating the pseudo-3D digital brain model. I put
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Simulation of bessel beam
Dear Dr. Fang, I am simulating the process of illuminating the pseudo-3D digital brain model. I put
9/11/24
Demián A. Vera
,
Qianqian Fang
3
8/22/24
Information printing
hi Demián, just to let yo know that I have added options in mcxlab/pmcx to suppress printing the mcx
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Information printing
hi Demián, just to let yo know that I have added options in mcxlab/pmcx to suppress printing the mcx
8/22/24
Demián A. Vera
,
Qianqian Fang
2
8/18/24
Scattering phase function
hi Demián, your code does not work because 2:pi:0.01:0 gives you an empty array. cfg.invcdf=invgauss(
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Scattering phase function
hi Demián, your code does not work because 2:pi:0.01:0 gives you an empty array. cfg.invcdf=invgauss(
8/18/24
Andrea Farina
,
Qianqian Fang
2
8/17/24
MMCLAB on Apple Silicon
hi Andrea, glad to hear from you. please see my reply on github https://github.com/fangq/mmc/issues/
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MMCLAB on Apple Silicon
hi Andrea, glad to hear from you. please see my reply on github https://github.com/fangq/mmc/issues/
8/17/24
adonald...@gmail.com
, …
Qianqian Fang
5
8/15/24
Replicating Photon Trajectories
Dr. Fang and Pauliina, Thank you for the explanation; that makes sense. I'll just run a single
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Replicating Photon Trajectories
Dr. Fang and Pauliina, Thank you for the explanation; that makes sense. I'll just run a single
8/15/24
Enes Menteşoğlu
,
Qianqian Fang
2
8/1/24
vol2surf exceeds array bound
hi Enes, this is rather an iso2mesh question. if you use cgalsurf as the method for vol2surf, you
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vol2surf exceeds array bound
hi Enes, this is rather an iso2mesh question. if you use cgalsurf as the method for vol2surf, you
8/1/24