I thought I put in the right step number for 1/1/6 stepping. Here is the Machine profile I made:
<machine>
<name>3G 5D Cupcake (Pololu XYZA, MakerGear Stepper Extruder)</name>
<geometry type="cartesian">
<!-- different pulleys on X and Y axii -->
<axis id="x" length="100" maxfeedrate="10000" stepspermm="94.1397046"/> <!-- sixteenth-step driver -->
<axis id="y" length="100" maxfeedrate="10000" stepspermm="94.1397046"/> <!-- sixteenth-step driver -->
<axis id="z" length="100" maxfeedrate="170" stepspermm="2320"/> <!-- sixteenth-step driver -->
<axis id="a" length="100000" maxfeedrate="3000" stepspermm="1487"/><!-- was: 100.470957613814818 -->
</geometry>
<tools>
<tool name="Makergear Stepper Extruder" model="Batch 1" diameter="0.35" stepper_axis="a" index="0" type="extruder" motor="true" fan="true" heatedplatform="true" motor_steps="3200" default_rpm="3" heater="true"/>
</tools>
<clamps></clamps>
<driver name="makerbot4g">
<!-- optional, defaults to first serial port found. <portname>COM1</portname> -->
<!-- required: we need 8 bit and 38400 baud. -->
<rate>38400</rate>
<parity>8</parity>
<!-- optional, defaults to 1. <databits>1</databits> -->
<!-- optional, defaults to N. <stopbits>N</stopbits> -->
<!--<debuglevel>5</debuglevel>-->
</driver>
<warmup>
</warmup>
<cooldown>
(Turn off steppers after a build.)
M18
</cooldown>
</machine>
O.