Share a pic of this and the *.stl file so we could be sure because there are several possible scenarios;
1. Your object leans because it is not centered on the build platform on replicatorg and part of it is actually below the platform with the whole thing at an angle. Just because it was oriented right in your CAD program doesn't mean that replicatorg will orient it the same way (also applies to makerware).
2. support structure on one side has collapsed. redesign with sturdier designed in support structures instead of the automatic structures made by replicatorg/makerware.
3. warping due to uneven cooling. print
Thingiverse 29493