[maker-devel] symbol lookup error: /usr/local/lib/libmpich.so.10: undefined symbol: MPIU_Strncpy

[Rob Syme]

Hi all

I'm trying to get mpi_maker up and running.

I've installed the latest version of MPICH from mpich.org/static/downloads/3.0.4/mpich-3.0.4.tar.gz, making sure to "./configure --enable-shared"

Everything seems to install without trouble, but running

    mpiexec -n 1 mpi_maker <ctl files>

gives:

    /usr/bin/perl: symbol lookup error: /usr/local/lib/libmpich.so.10: undefined symbol: MPIU_Strncpy

Does anybody here know how to fix this? Do I need to downgrade to an older version of MPICH?

Thanks!

Rob Syme

PhD Student

Curtin University

[Carson Holt]

You have to use MPICH2, the new MPICH3 is not compatible.  MPI version 3 is a completely new protocol implemented in MPICH3, and it breaks MAKER.  You can also use OpenMPI with the MAKER version 2.27.

Thanks,

Carson

_______________________________________________ maker-devel mailing list maker...@box290.bluehost.com http://box290.bluehost.com/mailman/listinfo/maker-devel_yandell-lab.org