Re: reslice Dicom volume

[Paul Yushkevich]

Hi Kate

The code in SNAP for reslicing volumes orthogonally is IRISSlicer. It takes as input a 3D image and returns 2D slices along each coordinate axis. As far as saving data back into DICOM, you would have to use ITK filters for that. 

Paul 

On Tue, Nov 6, 2012 at 1:18 AM, Kate <lisade...@gmail.com> wrote:

Hi Snap users,

I have a series of dicom images. I want to reslice the volume along another plane. Suppose my input is obtained axially, I now want oblique slices. I think the first step is understanding how SNAP displays an input volume in all 3 planes(axial,coronal,sagittal). What is the code written in SNAP for doing that? Also, in order to do that what all changes are made to the image and its header/dicom tags? If somebody could help me there, I guess I'll be able to figure out what to change to obtain oblique slices.......

Thanks a lot people

Cheers

Kate 

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Paul A. Yushkevich, Ph.D.
Assistant Professor
Penn Image Computing and Science Laboratory
Department of Radiology
University of Pennsylvania