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Ian Donaldson
4/23/15
iRefIndex 14 is now ready
iRefIndex 14 can now be downloaded from http://irefindex.org This public distribution includes data
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iRefIndex 14 is now ready
iRefIndex 14 can now be downloaded from http://irefindex.org This public distribution includes data
4/23/15
Ian Donaldson
12/13/13
iRefIndex release 13.0 is now ready
The iRefIndex web site is now at http://irefindex.org MITAB files for release 13.0 of iRefIndex are
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iRefIndex release 13.0 is now ready
The iRefIndex web site is now at http://irefindex.org MITAB files for release 13.0 of iRefIndex are
12/13/13
Ian Donaldson
6/21/13
iRefIndex release 12.0 is ready
The iRefIndex web site is now at http://irefindex.org MITAB files for release 12.0 of iRefIndex are
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iRefIndex release 12.0 is ready
The iRefIndex web site is now at http://irefindex.org MITAB files for release 12.0 of iRefIndex are
6/21/13
Ian Donaldson
3/15/13
iRefIndex release 10.0 MITAB files are ready
The iRefIndex web site has moved to http://irefindex.org MITAB files for release 10.0 of iRefIndex
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iRefIndex release 10.0 MITAB files are ready
The iRefIndex web site has moved to http://irefindex.org MITAB files for release 10.0 of iRefIndex
3/15/13
Ian Donaldson
3/2/13
multigenic diseases and interaction data
Antonio Mora's last paper from his Ph.D. thesis is published A survey of protein interaction data
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multigenic diseases and interaction data
Antonio Mora's last paper from his Ph.D. thesis is published A survey of protein interaction data
3/2/13
Ian Donaldson
11/13/12
iRefR used in new paper
For anyone working with iRefR (the R package for iRefIndex) you may be interested in a recent paper
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iRefR used in new paper
For anyone working with iRefR (the R package for iRefIndex) you may be interested in a recent paper
11/13/12
Simon
,
Sabry
2
5/23/12
Irefscape 1.18 willnot install correctly in cytoscape 2.8.3
First thing to check is the JVM (the java version you are using). What versions of java and Cytoscape
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Irefscape 1.18 willnot install correctly in cytoscape 2.8.3
First thing to check is the JVM (the java version you are using). What versions of java and Cytoscape
5/23/12
Hufeng Zhou
4/20/12
Re: [irefindex] Digest for irefindex@googlegroups.com - 2 Messages in 1 Topic
Dear Ian: Thanks very much for your rely. I understand that more clearly now, and I will first filter
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Re: [irefindex] Digest for irefindex@googlegroups.com - 2 Messages in 1 Topic
Dear Ian: Thanks very much for your rely. I understand that more clearly now, and I will first filter
4/20/12
Hufeng Zhou
,
i.m.do...@biotek.uio.no
2
4/19/12
About datasource of iRefindex
Dear Hufeng Yes. That is true. We made the decision to include OPHID for comparison purposes with
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About datasource of iRefindex
Dear Hufeng Yes. That is true. We made the decision to include OPHID for comparison purposes with
4/19/12
jirivoller
,
Sabry
2
3/18/12
iRefR question,
Hello Jiri, I have forwarded your question to The iRefR authors and you will get an answer shortly.
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iRefR question,
Hello Jiri, I have forwarded your question to The iRefR authors and you will get an answer shortly.
3/18/12
jirivoller
,
Sabry
2
3/14/12
cytoscape plugin - data+index not downloaded
Hello Jiri, Here is a direct link to the latest data download: ftp://ftp.no.embnet.org/irefindex/
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cytoscape plugin - data+index not downloaded
Hello Jiri, Here is a direct link to the latest data download: ftp://ftp.no.embnet.org/irefindex/
3/14/12
Paul Boddie
12/16/11
iRefIndex 9.0 legacy identifier mapping updated
Some discussions with the ever-helpful Brian Turner have led to the legacy identifier mapping being
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iRefIndex 9.0 legacy identifier mapping updated
Some discussions with the ever-helpful Brian Turner have led to the legacy identifier mapping being
12/16/11
ian.donaldson
12/5/11
irefindex FTP server is back up
The FTP server for iRefIndex is back up again. ftp://ftp.no.embnet.org/irefindex/ MITAB: ftp://ftp.no
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irefindex FTP server is back up
The FTP server for iRefIndex is back up again. ftp://ftp.no.embnet.org/irefindex/ MITAB: ftp://ftp.no
12/5/11
ian.donaldson
12/2/11
irefindex FTP server is down
The FTP server used by iRefIndex is currently down and will not be restored until Monday, December
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irefindex FTP server is down
The FTP server used by iRefIndex is currently down and will not be restored until Monday, December
12/2/11
ian.donaldson
11/25/11
iRefR - an R package for iRefIndex
Antonio Mora's paper on the iRefR has been published. http://www.biomedcentral.com/1471-2105/12/
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iRefR - an R package for iRefIndex
Antonio Mora's paper on the iRefR has been published. http://www.biomedcentral.com/1471-2105/12/
11/25/11
Paul Boddie
,
Ian Donaldson
3
11/24/11
iRefIndex 9.0
On Nov 22, 5:32 pm, Paul Boddie <paul.bod...@biotek.uio.no> wrote: > > The PSICQUIC Web
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iRefIndex 9.0
On Nov 22, 5:32 pm, Paul Boddie <paul.bod...@biotek.uio.no> wrote: > > The PSICQUIC Web
11/24/11
ian.donaldson
10/18/11
iRefScape paper published
We are pleased to announce that the iRefScape paper has been published. http://www.biomedcentral.com/
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iRefScape paper published
We are pleased to announce that the iRefScape paper has been published. http://www.biomedcentral.com/
10/18/11
ian.donaldson
5/6/11
Interaction databases on the same page
Our correspondence in Nature Biotechnology "Interaction databases on the same page" came
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Interaction databases on the same page
Our correspondence in Nature Biotechnology "Interaction databases on the same page" came
5/6/11
ian.donaldson
2/17/11
iRefIndex release 8.0 now available through iRefWeb and publications
See http://wodaklab.org/iRefWeb/ iRefWeb offers a rich set of filters to query and retrieve
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iRefIndex release 8.0 now available through iRefWeb and publications
See http://wodaklab.org/iRefWeb/ iRefWeb offers a rich set of filters to query and retrieve
2/17/11
Sabry
2/13/11
iRefIndex web services are on-line
Dear iRefIndex users, The iRefndex psicquic and psiscore services are now on-line. These services
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iRefIndex web services are on-line
Dear iRefIndex users, The iRefndex psicquic and psiscore services are now on-line. These services
2/13/11
ian.donaldson
2/11/11
irefindex.uio.no down
irefindex.uio.no is down This effects psicquic services and means users are unable to browse through
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irefindex.uio.no down
irefindex.uio.no is down This effects psicquic services and means users are unable to browse through
2/11/11
Sabry
1/24/11
iRefIndex beta 8.0 available.
Dear iRefIndex users, iRefIndex beta8.0 is now available.This release was compiled in December-2010
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iRefIndex beta 8.0 available.
Dear iRefIndex users, iRefIndex beta8.0 is now available.This release was compiled in December-2010
1/24/11
Sabry
11/12/10
Error correction to extended MI-TAB 2.6 release.
Dear iRefIndex user, There were some interactions missing in the MITAB 2.6 version of iRefIndex and
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Error correction to extended MI-TAB 2.6 release.
Dear iRefIndex user, There were some interactions missing in the MITAB 2.6 version of iRefIndex and
11/12/10
Sabry
10/14/10
Changes to iRefindex psicquic service
Dear iRefindex psicquic users, The iRefIndex psicquic web service is now updated to version 1.1.6 and
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Changes to iRefindex psicquic service
Dear iRefindex psicquic users, The iRefIndex psicquic web service is now updated to version 1.1.6 and
10/14/10
Sabry
10/14/10
iRefIndex data in PSI-MITAB 2.6 format
Dear iRefindex users, Today we release the iRefIndex version 7.0 in PSI-MITAB format 2.6. This format
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iRefIndex data in PSI-MITAB 2.6 format
Dear iRefindex users, Today we release the iRefIndex version 7.0 in PSI-MITAB format 2.6. This format
10/14/10
Ian Donaldson
,
Brian Turner
2
6/25/10
iRefScape plugin for Cytoscape
Post this on cytoscape discuss as well. B. ______________________________________________________
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iRefScape plugin for Cytoscape
Post this on cytoscape discuss as well. B. ______________________________________________________
6/25/10
Sabry
5/25/10
[irefindex] iRefIndex beta 7.0 released.
Dear iRefIndex users, iRefIndex beta7.0 is now available.This release was compiled in January 2010
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[irefindex] iRefIndex beta 7.0 released.
Dear iRefIndex users, iRefIndex beta7.0 is now available.This release was compiled in January 2010
5/25/10
Sabry
2
2/9/10
iRefIndex release beta 6.1 (Error correction for beta6.0)
New README for beta6.1 ; http://irefindex.uio.no/wiki/README_iRefIndex_MITAB_6.1
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iRefIndex release beta 6.1 (Error correction for beta6.0)
New README for beta6.1 ; http://irefindex.uio.no/wiki/README_iRefIndex_MITAB_6.1
2/9/10
Sabry
12/28/09
iRefIndex release beta 6.0
Dear iRefIndex users, iRefIndex beta6.0 is now available. Sources used: http://irefindex.uio.no/wiki/
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iRefIndex release beta 6.0
Dear iRefIndex users, iRefIndex beta6.0 is now available. Sources used: http://irefindex.uio.no/wiki/
12/28/09
Sabry
6/16/09
iRefIndex beta4
Hi, The beta4 release of iRefIndex is ready. http://irefindex.uio.no/wiki/Statistics_iRefIndex_free_4
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iRefIndex beta4
Hi, The beta4 release of iRefIndex is ready. http://irefindex.uio.no/wiki/Statistics_iRefIndex_free_4
6/16/09