Ok you will have to delete all manual urls from the URL list and let the crawler crawl all over again, and this time your filter will apply - I assume you did set it up using either wildcards or regex. Then, after a full crawl, for the fresh URL list, set your frequencies and priorities to whatever you want if the default values are not ok.
But this is not really enough. You have to be able to exclude those urls from the website as well, and you'd do that either by robots.txt directives that target them in some way, or, better, by adding robots noindex meta tags to them (if you are able to do that given your site's software platform).
You need to do that because regardless of whatever is or isn't in the sitemap Google crawls and indexes everything it is allowed to from the site anyway.