GO-Elite

Hi Vernon, Have you tried running GO-Elite through AltAnalyze? https://altanalyze.readthedocs.io/en/

Thank you for your email. Indeed, the webservice is no longer supported, however, the analyses can be

Hi Divya, This problem occurs when you download all resources because GO-Slim changed it's

Hi Divya, It looks like there is a line that needs to be fixed. In the source code (GO_Elite.py) find

Hi, The Z Score formula from this webpage missing a right parentheses in the denominator. Is it

Hi Pengcheng, Actually both the compiled and source code versions of GO-Elite can run in fully

Hi Ben, We are just a bit delayed in getting updates out, however, there is actually a function in

Hi Katja, Looks like one of the identifiers has some illegal characters that are causing problems.

When the system codes were first created, Ensembl and En made good sense. However, since the name

Hey Stan, Thanks for noticing this. I haven't seen this before but will eliminate any pathway

Hi Sheena, Either Ensembl used to have the transcript-level annotations for the Exon arrays or I was

Version 1.2.1 of GO-Elite is now available for download at http://www.genmapp.org/go_elite. GO-Elite

Hi Alex, I agree with your suggestion. A different consideration/question: If all gene names in '

Hello Iris, For the GUI you need to have the Python TkInter installed (python-tk, python-tk-dev).

Hello, I've updated to GO-Elite version 1.2 beta and am putting in some data from Affymetrix

Hi Karen, Thanks for the sending the output and this current bug. Your input files look good so I

Hey Stan, Thanks for the report. Alex has setup an Ubunto machine that I will try this on as well as

Hi Andreia, You bring up some important points. The section of the tutorial and help you are

Hi Andreia, This has also been reported by other users with the latest version of GO-Elite (posted

Hey Stan, Thanks for the reporting these issues. Most of these still do need to be addressed. As

Hi Darlene, Amigo doesn't provide the gene-GO associations for GO-Elite, rather, these

Your kind help is greatly appreciated. Thanks a lot. On Wed, May 13, 2009 at 1:17 PM, Nathan

Hi Sheena, Thank you for using GO-Elite. For some reason, AMIGO doesn't have good gene

Interesting... I'll check it out. NS On Wed, 18 Mar 2009 23:23:08 -0700 Alexander Pico <apico@

Hi all, A good place to post feature requests is at: http://groups.google.com/group/go-elite/web/

Hey Stan, From the stand-point of getting the richest GO and pathway links, it looks like EntrezGene

Hi Nathan, I started to figure that out while I was reading the database instructions. Updating the

Hey Nathan, Thanks again for your quick reply. I'm feeling utterly stupid now. (-; I received the

As was recently brought to my attention, there were two critical bugs in the latest version of GO-

FYI, the GO-Elite google group was being seriously spammed and hacked the last two weeks (several