The memory chip used by the game to save games is part of the
cartridge hardware. It has nothing to do with the emulator you are
using. In other words, if Pokemon Fire Red uses a 128kB FlashROM to
save, all emulators will use the same 128kB FlashROM emulation.
PS: And yes, VGBA is up to 3.8.13 on the Android Market. If you have
not yet upgraded, now may be a good time to delete that pirated copy
you have and buy the legitimate app.