Web Images Videos Maps News Shopping Gmail more »
Recently Visited Groups | Help | Sign in
Google Groups Home
Group info
Recent pages and files
Percentile fold change filtering    

[Version 10/1/05+] We can also use the "Analysis/Filter Genes/Percentile filtering" function to select genes by its fold change between a high and a low percentile across samples. The filtered gene list can be clustered and viewed as usual. This gene list file also contains the percentile-standardized data, with the two percentiles for each gene linearly scaled to the +/- displaying range (specified at “Options/Clustering”). To view the percentile-standardized data, first do 'Get external data' to read in this exported data file, and then do “Analysis/Clustering” with “Options/Standardize rows” unchecked.

 

ANOVA filtering can use sample category information to select genes that vary among sample groups in a supervised way.

 

Version: 
Create a group - Google Groups - Google Home - Terms of Service - Privacy Policy
©2009 Google