More Manual Pages - dChip Software

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Page name	Author	Size	Created	Edited

Introduction, installation and user support	Cheng Li	26Bytes	Jan 9	Jan 19
Introduction to dChip	Cheng Li	4.5KB	Jan 19	Feb 25
dChip references	Cheng Li	6.7KB	Jan 22	Apr 10
Selected dChip applications	Cheng Li	5.7KB	Jan 22	Jan 22
dChip tutorials	Cheng Li	2.5KB	Feb 25	Aug 25
Very quick tutorial	Cheng Li	5.4KB	Feb 25	Feb 25
Tutorial using leukemia data by Armstrong et al.	Cheng Li	6.1KB	Feb 25	Feb 25
Downloading dChip software	Cheng Li	2.8KB	Dec 28 2008	Dec 28 2008
64 bit (x64) version	Cheng Li	859Bytes	Feb 25	Mar 9
Running dChip on Mac or Linux	Cheng Li	4.5KB	Dec 28 2008	Jan 9
dChip command line version on Linux	Cheng Li	9.7KB	Dec 29 2008	Dec 29 2008
Memory requirement	Cheng Li	1.5KB	Jan 9	Jan 9
User group and posting guidelines	Cheng Li	2.4KB	Dec 28 2008	Apr 13
Trouble-shooting tips	Cheng Li	2.2KB	Jan 9	Jan 9
Source code and development	Cheng Li	2.8KB	Jan 19	Jan 19
unpublished changes by Cheng Li - view and edit
Gene information file	Cheng Li	130Bytes	Jan 9	Jan 9
Information file for Gene ST arrays	Cheng Li	1.6KB	Jan 9	Jan 10
Exon array data analysis	Cheng Li	26Bytes	Jan 19	Jan 19
Process exon array data	Cheng Li	2.1KB	Jan 19	Feb 21
View exon array data along chromosome	Cheng Li	2.7KB	Jan 19	Jan 19
Convert exon array data to HG-U133 gene level data	Cheng Li	1.4KB	Jan 19	Mar 12
Alternative splicing analysis	Cheng Li	4.1KB	Feb 21	Mar 12
Process tiling sub-array	Cheng Li	3.6KB	Jan 19	Jan 19
Gene ST array	Cheng Li	1.2KB	Jan 19	Jul 13
Automate dChip functions	Cheng Li	3.2KB	Jan 22	Jan 24
Interface with the R software	Cheng Li	5.3KB	Jan 27	Jul 14
SNP array LOH and copy number analysis	Cheng Li	169Bytes	Jan 15	Feb 26
Copy number in paired or unpaired tumors	Cheng Li	884Bytes	Jan 13	Jan 13
SNP information file	Cheng Li	3.0KB	Feb 16	Feb 16
Adjust batch and individual effect	Cheng Li	2.3KB	Jan 15	Jan 15
Trimmed analysis	Cheng Li	4.9KB	Feb 26	Feb 26
Copy number summary plot	Cheng Li	2.9KB	Feb 26	Feb 26
Export data in Wiggle format	Cheng Li	1.8KB	Feb 26	Feb 26
Major copy proportion analysis	Cheng Li	1.8KB	Feb 26	Feb 26
Show LOH in the copy number view	Cheng Li	1.4KB	Feb 26	Feb 26
UCLA microarray courses	Cheng Li	5.9KB	Feb 25	May 30
Combine sub-arrays for analysis	Cheng Li	6.2KB	Mar 11	Mar 11
being edited by Samir Amin
Downloadable information files	Cheng Li	308Bytes	Mar 30	Mar 30
Find a refGene or chromosome position	Cheng Li	1.2KB	Apr 2	Apr 2
microRNA analysis	Cheng Li	1.5KB	Apr 9	Apr 9
Percentile fold change filtering	Cheng Li	1.5KB	Apr 12	Apr 12
Save and load chromosome analysis results	Cheng Li	911Bytes	Apr 6	Apr 6
View probe set data of all arrays	Cheng Li	947Bytes	Apr 9	Apr 9