Re: [cytoscape-helpdesk] pathway analysis

[swaraj basu]

Hello,
Well its a tricky question.All plugins available, like Pesca
and Shortest path finder tend to find the shortest paths. As far as i
can tell u should have a start and end node to find all possible paths
between them. You can also check this plugin
http://www.metnetdb.org/fcmodeler/cytoscape/plugins/SubCreator1-9.5.jar.
It gets u the subgraph creator plugin where u can find all possible
paths between two given node. have a nice Cytoscaping. :-)

On Wed, Dec 2, 2009 at 9:37 PM, jean-charles.martin
<jean-char...@univmed.fr> wrote:
>
>
> Hello to everybody,
>
> I’m looking for a plugin that would allow to specifically select the longest
> pathway in a graph, starting for any given single node. Does this exist?
>
> Thanks for the help
>
>
>
> Rgds
>
> jc
>
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[jean-charles.martin]

Thanks, i'll try this!
Best rgds

-----Message d'origine-----
De : cytoscape...@googlegroups.com
[mailto:cytoscape...@googlegroups.com] De la part de swaraj basu
Envoyé : samedi 12 décembre 2009 06:48
À : cytoscape...@googlegroups.com
Objet : Re: [cytoscape-helpdesk] pathway analysis