clustering from arbitrary distance matrix

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Brenton Walker

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Dec 23, 2009, 4:14:52 PM12/23/09
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Hi,
I have an arbitrary (symmetric) distance matrix that I am trying to do
hierarchial clustering on. I can import the network into cytoscape with
the distances as edge attributes, but the ClusterMaker plugin does not
seem to support using that as the metric.

Am I missing something in ClusterMaker? Is there another plugin that lets
you cluster based on edge weights?

Thanks,
Brenton
bre...@cs.wisc.edu

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