Importing kegg pathway into cytoscape

[Sergio]

Hello everybody,
I am a new user of cytoscape. My problem is that after downloading a
kegg pathway (from ftp://ftp.genome.jp/pub/kegg/xml/biopax/non-metabolic/organisms/hsa/hsa04530.owl)
into my computer, I can not import it to cytoscape.
The error follows as:
Root Error
Caused by: java.lang.NullPointerException:
org.mskcc.biopax_plugin.util.biopax.BioPaxUtil.extractRdfId
(BioPaxUtil.java:184)
org.mskcc.biopax_plugin.mapping.MapBioPaxToCytoscape.addControlInteraction
(MapBioPaxToCytoscape.java:638)
org.mskcc.biopax_plugin.mapping.MapBioPaxToCytoscape.mapInteractionEdges
(MapBioPaxToCytoscape.java:381)
org.mskcc.biopax_plugin.mapping.MapBioPaxToCytoscape.doMapping
(MapBioPaxToCytoscape.java:208)
org.mskcc.biopax_plugin.plugin.BioPaxGraphReader.read
(BioPaxGraphReader.java:107)
cytoscape.Cytoscape.createNetwork(Cytoscape.java:1384)
cytoscape.actions.LoadNetworkTask.run(LoadNetworkTask.java:244)
cytoscape.task.util.TaskWrapper.run(TaskManager.java:160)

Does anybody know what the problem could be?
Thanks in advance,
Best,
Sergio.

[Keiichiro Ono]

Hi.
I confirmed it and looks it is a bug.
I open a new bug report for this issue.

Thanks.
Kei

2009/12/16 Sergio <sergio...@yahoo.es>:

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Keiichiro Ono ko...@ucsd.edu

Cytoscape Core Developer Team: http://www.cytoscape.org/
UCSD School of Medicine Trey Ideker Lab: http://chianti.ucsd.edu/idekerlab/

[Sergio]

Thanks a lot!
Best,
Sergio.

On Dec 17, 1:22 am, Keiichiro Ono <kei...@gmail.com> wrote:
> Hi.
> I confirmed it and looks it is a bug.
> I open a new bug report for this issue.
>
> Thanks.
> Kei
>

> 2009/12/16 Sergio <sergioherd...@yahoo.es>:

>
>
>
> > Hello everybody,
> > I am a new user of cytoscape. My problem is that after downloading a

> > kegg pathway (fromftp://ftp.genome.jp/pub/kegg/xml/biopax/non-metabolic/organisms/hsa/h...)

> Keiichiro Ono    k...@ucsd.edu