Re: Handling different edge types

[Pablo Porras]

Hi Scott,

Ok, it seems I misunderstood your question. Have you tried selecting the is_a edges, then selecting those nodes connected by them and applying the layout just to those nodes? I am not sure if that's what you want, but it might help.

Cheers,

Pablo.

El lunes, 19 de noviembre de 2012 17:15:11 UTC, Scott Zuyderduyn escribió:

Yes, they are "is_a" relationships and I've been able to filter, hide, delete, etc. but have not been able to find a way to do a layout based only on the "is_a" edges while leaving the other types intact (or alternatively, loading them onto the existing network after completing the "is_a" layout). :(

Scott

On Saturday, November 17, 2012 8:15:13 AM UTC-5, Pablo Porras wrote:

Hi Scott,

If you have an edge attribute identifying the "is_a" relationships, as I think you should, you can filter out the rest of the edges in the 'Select' menu or by creating a filter and then creat a new network with only the desired edges.

Cheers,

Pablo.

El viernes, 16 de noviembre de 2012 17:16:20 UTC, Scott Zuyderduyn escribió:

I am working with a network where the nodes are GO terms and a (minority) subset of the edges represent the GO relationships (parent-child terms, etc.).  The rest of the edges represent relationships between terms that come from my analysis.  I would really like to be able to set the layout based on the native relationship edges, and ignore the rest.  Importing a set of edges into an existing network would work, but I can't see any way to do this.  Any ideas?

Scott