> How did you scale the network back to a more condensed version.

> Thank you in advance

> On Fri, Jul 6, 2012 at 11:34 PM, piet molenaar <piet....@gmail.com> wrote:

>> Hi Asmaa,
>> I had some success using the Edge-Weighted Force-Directed (Biolayout)
>> layout and scaling the network back to a more dense version.
>> Some nodes still overlap but this is the same in the figure attached.
>> Hope this helps,
>> Cheers,
>> Piet

>> On Fri, Jul 6, 2012 at 3:59 PM, Asma rabe <asma.r...@gmail.com> wrote:

>>> Hi All,

>>> I appreciate if you can tell me how to visualize a network such that
>>> nodes with highest degree come to the front of network.
>>> Attached is a supplementary figure from * Molecular Systems Biology
>>> 6:417*   doi:10.1038/msb.2010.71   at which network is visualized as
>>> mentioned above.
>>> I could visualize the nodes such that node size corresponds to node
>>> degree but i could not bring nodes with highest degree on the top of other
>>> nodes.

>>> I appreciate your time and consideration.
>>> Thank you in advance.

>>> Best Regards,
>>> Asmaa

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>> --
>> Piet Molenaar
>> piet....@gmail.com
>> Department of Oncogenomics, M1-131
>> Academic Medical Center
>> University of Amsterdam
>> Meibergdreef 9
>> 1105 AZ Amsterdam
>> the Netherlands

>> tel (+31) 20-5666592
>> fax (+31) 20-6918626

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