I've some Mouse protein interaction data. The nodes are named by their
Uniprot ID and in the *.sif file the interactions appear like this:
uniprotkb:Q80Y17 - uniprotkb:Q9JK84
uniprotkb:Q80Y17 - uniprotkb:Q62074
uniprotkb:Q80Y17 - uniprotkb:Q9JK83
After loading the sif file in Cytoscape v2.8 I wish to add GO
annotation to the individual nodes. However all my attempts failed
when using the online gene association information.
Can anybody tell me what 'primary key'/'Key attribute for network
values' I've to consider.
I tried the yeast example and that runs fine.
Thanks
I followed these two instructions:
http://www.cytoscape.org/manual/Cytoscape2_6Manual.html#Import%20Ontology%20and%20Annotation
http://genmapp.org/GOLayout/GOLayout.html