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Enrichment Map 1.2 Release
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Ruth Isserlin  
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 More options Jul 7 2011, 1:49 pm
From: Ruth Isserlin <ruth.isser...@utoronto.ca>
Date: Thu, 7 Jul 2011 13:49:04 -0400
Local: Thurs, Jul 7 2011 1:49 pm
Subject: Enrichment Map 1.2 Release
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Hi,
A new version of the Enrichment Map Plugin has been released.  

New features include (http://baderlab.org/EnrichmentMap/ReleaseNotesv1.2):
  * Ability to compare enrichment results from two different species or two different expression platforms. Overlaps are created for each expression set separately.
  * Creation of Enrichment maps based solely on a gene set file (for large gmt files requires a lot of memory)
  * New similarity metric using combined overlap and jaccard coefficient based on a constant K defined by the user.
  * Added Bingo file support (http://www.psb.ugent.be/cbd/papers/BiNGO/Home.html)
  * Added ability to view gene in each geneset even if an expression file has not been loaded.
  * Added elementary support for exporting heatmap view as pdf (in addition to being able to export a text file).
  * Bulk Enrichment map creation - designed for multiple GSEA results where an EM is wanted for each GSEA run. Using the rpt file of each GSEA result a Cytoscape session with the Enrichment Map and a pdf of each network is generated
  * Bug fixes

Enrichment Map v1.2  is available for download from  the plugin browser or our website (http://baderlab.org/Software/EnrichmentMap).

Thanks,
Ruth Isserlin


 
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