Hi everyone.
All of Cytoscape-compatible scripting engines have been updated. The
following binaries are included in the plugins:
Ruby - JRuby 1.4.0
Python - Jython 2.5.1
Groovy - Groovy 1.6.7
JavaScript - Rhino 1.7.2
Sample Scripts are available here:
http://cytoscape.wodaklab.org/wiki/ScriptingPlugins
Note for Ruby users:
Please install JRuby by yourself. From this version, you can install
gems separately, so you can use all JRuby compatible RubyGems with
Cytoscape.
Thanks.
Kei
--
Keiichiro Ono
ko...@ucsd.edu
Cytoscape Core Developer Team:
http://www.cytoscape.org/
UCSD School of Medicine Trey Ideker Lab:
http://chianti.ucsd.edu/idekerlab/