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Setting Attributes to nodes and edges dimensions and visualizing them
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Franktwis  
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 More options Nov 3, 11:20 am
From: Franktwis <francescomusacc...@gmail.com>
Date: Tue, 3 Nov 2009 08:20:37 -0800 (PST)
Local: Tues, Nov 3 2009 11:20 am
Subject: Setting Attributes to nodes and edges dimensions and visualizing them
Hi,
I want to build  a Graph and setting size of nodes and edge varying
after some operations.
If I create a bunch of CyNodes using the Cytoscape.getCyNode() method,
then create edges using those nodes with the
Cytoscape.getCyEdge() method.  Then, call Cytoscape.createNetwork()
with the
lists of nodes and edges I just created.  Once I've got the CyNodes
and
CyEdges  how can I use its attributes to set their dimension and how
can I display all the net?

In particular I want to increase the dimension of a Node everytime I
add an edge to it. And everytime that there is a new relation between
node A and node B I wanna to  increase size of the edge between them.
How can I do it?
thanks to all!


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Keiichiro Ono  
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 More options Nov 3, 2:12 pm
From: Keiichiro Ono <kei...@gmail.com>
Date: Tue, 3 Nov 2009 11:12:23 -0800
Local: Tues, Nov 3 2009 2:12 pm
Subject: Re: [Cytoscape-discuss] Setting Attributes to nodes and edges dimensions and visualizing them
Hi.
You can do it by adding numerical attribute "degree" or something, and
when you add an edge to a node, just increase the number.  Beside the
attribute, you need to create a Visual Style to reflect the change to
node size.  This can be done by creating a continuous mapping
programatically.  Every time you increase the degree attribute, you
can apply this Visual Style, then the node size will be changed
automatically.

Kei

2009/11/3 Franktwis <francescomusacc...@gmail.com>:

--
Keiichiro Ono    k...@ucsd.edu

Cytoscape Core Developer Team: http://www.cytoscape.org/
UCSD School of Medicine Trey Ideker Lab: http://chianti.ucsd.edu/idekerlab/


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Angelo Ulivieri  
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 More options Nov 4, 7:07 am
From: Angelo Ulivieri <angeloulivi...@yahoo.com>
Date: Wed, 4 Nov 2009 04:07:14 -0800 (PST)
Local: Wed, Nov 4 2009 7:07 am
Subject: Re: [Cytoscape-discuss] Re: Setting Attributes to nodes and edges dimensions and visualizing them

Sorry,
I'm trying to study these classes but I can't understand how to use them. Do you have a simple example of how to do it?
And what does means "continuous mapping programatically", how can I do it?
thanks again

________________________________
From: Keiichiro Ono <kei...@gmail.com>
To: cytoscape-discuss@googlegroups.com
Sent: Tue, November 3, 2009 8:12:23 PM
Subject: [Cytoscape-discuss] Re: Setting Attributes to nodes and edges  dimensions and visualizing them

Hi.
You can do it by adding numerical attribute "degree" or something, and
when you add an edge to a node, just increase the number.  Beside the
attribute, you need to create a Visual Style to reflect the change to
node size.  This can be done by creating a continuous mapping
programatically.  Every time you increase the degree attribute, you
can apply this Visual Style, then the node size will be changed
automatically.

Kei

2009/11/3 Franktwis <francescomusacc...@gmail.com>:

--
Keiichiro Ono    k...@ucsd.edu

Cytoscape Core Developer Team: http://www.cytoscape.org/
UCSD School of Medicine Trey Ideker Lab: http://chianti.ucsd.edu/idekerlab/


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