MetScape release 1.0

[Jing Gao]

The CCMB/NCIBI MetScape 1.0 was released on September 1 2009 to
Cytoscape!
MetScape 1.0 is verified to work in Cytoscape v2.6.x. Please visit
MetScape website for more information http://metscape.ncibi.org/.

Version 1.0 has the following new features:

Allow Compound Name Search
-Besides KEGG IDs, users are allowed to enter compound names to
start the search
-Users can browse all compounds from NCIBI/metabolomic database
Show Compound/Reaction attributes on Result Panel
-Showing compound name, alias, mass, cas, formula, smiles and 2D
structure
-Showing reaction equation, pathway, reversibility, enzyme and
related genes
Link Compound/Reaction to External Data Sources
-Link compound to MiMI, PubChem, ChEBI, BioCyc, KEGG and HMDB
-Link reaction to MiMI and KEGG
Scale Input Experiment Data
-For input data with large data range, users can choose to scale
input data range from 0 to 10 or log input data to get better
visualization results

Any suggestions and questions please send email to mimi-
he...@umich.edu.

Best Regards,

The MetScape Team