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csc2417-f10
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Michael Brudno
12/22/10
graded hw3
I have these; the grades ranged from 35 to 40/40, so everyone did well. I am around only tomorrow, so
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graded hw3
I have these; the grades ranged from 35 to 40/40, so everyone did well. I am around only tomorrow, so
12/22/10
Orion Buske
12/14/10
Re 2417 hw3
* If you received a bunch of copies of this message, I'm terribly sorry. My mail client has been
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Re 2417 hw3
* If you received a bunch of copies of this message, I'm terribly sorry. My mail client has been
12/14/10
Orion
,
Michael Brudno
4
12/12/10
HW3 1b
yes. On Sun, Dec 12, 2010 at 1:33 PM, Orion Buske <orion...@gmail.com> wrote: Okay, and to
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HW3 1b
yes. On Sun, Dec 12, 2010 at 1:33 PM, Orion Buske <orion...@gmail.com> wrote: Okay, and to
12/12/10
Yue
,
Michael Brudno
2
12/10/10
HW3 Q1a
No; the question asks you to build an hMM representation of a profile that takes CpGs into acct. On
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HW3 Q1a
No; the question asks you to build an hMM representation of a profile that takes CpGs into acct. On
12/10/10
Orion
, …
Yue Li
17
12/8/10
HW3 2c
Sorry. I missed the early message where my question was already addressed. My apology. On 2010-12-07,
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HW3 2c
Sorry. I missed the early message where my question was already addressed. My apology. On 2010-12-07,
12/8/10
Michael Brudno
12/7/10
hw2 grading scheme
Here is the hw2 marking scheme. All complaints to the TA (shobhit@) with a cc: to me. Cheers, -Mike =
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hw2 grading scheme
Here is the hw2 marking scheme. All complaints to the TA (shobhit@) with a cc: to me. Cheers, -Mike =
12/7/10
Lev Naiman
, …
Michael Brudno
12
12/2/10
HW3 Questions
The 39. On Thu, Dec 2, 2010 at 3:32 PM, Brian <uts...@gmail.com> wrote: > Well then my
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HW3 Questions
The 39. On Thu, Dec 2, 2010 at 3:32 PM, Brian <uts...@gmail.com> wrote: > Well then my
12/2/10
Michael Brudno
11/28/10
hw3 + project
Hi All, HW3 is posted online. Due date is december 9th, as for undergrads I am not allowed to have it
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hw3 + project
Hi All, HW3 is posted online. Due date is december 9th, as for undergrads I am not allowed to have it
11/28/10
Orion
, …
Brian
11
11/22/10
A few PS2 questions...
Sorry for any confusion. My example was not the -optimal- phylogeny (or most parsimonious,
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A few PS2 questions...
Sorry for any confusion. My example was not the -optimal- phylogeny (or most parsimonious,
11/22/10
Orion
, …
Michael Brudno
7
11/22/10
PS2 Q1B
the third. On Mon, Nov 22, 2010 at 12:01 AM, Brian <uts...@gmail.com> wrote: > Out of
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PS2 Q1B
the third. On Mon, Nov 22, 2010 at 12:01 AM, Brian <uts...@gmail.com> wrote: > Out of
11/22/10
Michael Brudno
, …
Recep Çolak
5
11/19/10
OH tomorrow
The intent was to extend *both* to the weighted case and to the fact that you are chaining rectangles
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OH tomorrow
The intent was to extend *both* to the weighted case and to the fact that you are chaining rectangles
11/19/10
Michael Brudno
11/19/10
Re: counting breakpoints
> Now that I'm thinking about it more, I'm not sure if I really understood the >
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Re: counting breakpoints
> Now that I'm thinking about it more, I'm not sure if I really understood the >
11/19/10
Brian
,
Michael Brudno
2
11/18/10
A2, Q1B
I am expecting a non-heirustic algorithm that is O(n^2). Anything more is bonus. On Wed, Nov 17, 2010
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A2, Q1B
I am expecting a non-heirustic algorithm that is O(n^2). Anything more is bonus. On Wed, Nov 17, 2010
11/18/10
Brian
,
Michael Brudno
3
11/2/10
A1, Q2B Solution
Oh okay, that's what I thought. I did some calculations and got that the partition sizes were [j
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A1, Q2B Solution
Oh okay, that's what I thought. I did some calculations and got that the partition sizes were [j
11/2/10
Michael Brudno
11/1/10
HW2 is online
Hi Everyone, HW2 is now online. I'll be away, but should still have access to e-mail for any
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HW2 is online
Hi Everyone, HW2 is now online. I'll be away, but should still have access to e-mail for any
11/1/10
Michael Brudno
11/1/10
hw1 grading scheme
So our class TA is Shobhit Jain, his e-mail is shobhit@cs. Below is his grading scheme for HW1.
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hw1 grading scheme
So our class TA is Shobhit Jain, his e-mail is shobhit@cs. Below is his grading scheme for HW1.
11/1/10
Yeleiny Bonilla
,
Michael Brudno
3
11/1/10
asking for an email
thanks. On Mon, Nov 1, 2010 at 6:50 PM, Michael Brudno <bru...@gmail.com> wrote: mfiume@cs On
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asking for an email
thanks. On Mon, Nov 1, 2010 at 6:50 PM, Michael Brudno <bru...@gmail.com> wrote: mfiume@cs On
11/1/10
LowSocett
10/31/10
Top funniest videos 2010 Most popular category: funny sayings
The funniest videos 2010! . Rated 10/10 funniest video october 2010! This one is awesome! http://
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Top funniest videos 2010 Most popular category: funny sayings
The funniest videos 2010! . Rated 10/10 funniest video october 2010! This one is awesome! http://
10/31/10
RadugaMan
10/29/10
Top funniest videos 2010 Most popular category: funny videos
The funniest videos 2010! . october-november 2010 top funniest video: This one is realy funny)) URL
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Top funniest videos 2010 Most popular category: funny videos
The funniest videos 2010! . october-november 2010 top funniest video: This one is realy funny)) URL
10/29/10
Michael Brudno
,
Aziz Mezlini
2
10/27/10
Re: CS 2417 Assignment 1, Q1B
Hi everyone Is there someone still looking for a partner? I am an exchange student from France:
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Re: CS 2417 Assignment 1, Q1B
Hi everyone Is there someone still looking for a partner? I am an exchange student from France:
10/27/10
Brian
10/21/10
Project Partner
So now that A1 is out of the way, is anybody still looking for a project partner who's willing to
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Project Partner
So now that A1 is out of the way, is anybody still looking for a project partner who's willing to
10/21/10
Brian
, …
Michael Brudno
7
10/20/10
A1, Q2B
Certainly. On Wed, Oct 20, 2010 at 10:44 AM, Yeleiny Bonilla <neininy...@gmail.com> wrote:
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A1, Q2B
Certainly. On Wed, Oct 20, 2010 at 10:44 AM, Yeleiny Bonilla <neininy...@gmail.com> wrote:
10/20/10
Michael Brudno
10/15/10
Re: Q4
> Should our solution for q4 work for both global and local? Only for global alignment.
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Re: Q4
> Should our solution for q4 work for both global and local? Only for global alignment.
10/15/10
Michael Brudno
10/14/10
Re: CSC 2417 A1
> I have some question regarding the assignment. In general I have spent a lot > of time and
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Re: CSC 2417 A1
> I have some question regarding the assignment. In general I have spent a lot > of time and
10/14/10
Michael Brudno
, …
Orion
10
10/13/10
hw1 on the web
No, L should not be a parameter in the running time. On Wed, Oct 13, 2010 at 11:54 AM, Orion <
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hw1 on the web
No, L should not be a parameter in the running time. On Wed, Oct 13, 2010 at 11:54 AM, Orion <
10/13/10
Leah Spontaneo
10/4/10
Partner for the Project
Hello, If anyone is looking for a partner for the project, I am happy to pair up. I don't know a
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Partner for the Project
Hello, If anyone is looking for a partner for the project, I am happy to pair up. I don't know a
10/4/10
Yele
,
Michael Brudno
2
9/23/10
the bidirected bruijn graph for genome assembly
On the graph on the right, the nodes are the possible 2-long sequences of DNA, the edges the 3-long
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the bidirected bruijn graph for genome assembly
On the graph on the right, the nodes are the possible 2-long sequences of DNA, the edges the 3-long
9/23/10