cpath-dev

Hi Ben, Thanks. The URL I would like to use is http://cpath.ccbr.utoronto.ca:8180/pc/ Ruth From:

Hi Pradeep, It complains of missing classes: 1)In org.mskcc.pathdb.action.web_api.biopax_mode.

Hi, Currently my "Download" tab in my instance of cpath direct to http://awabi.cbio.mskcc.

Hi Ethan, Thanks for the suggestion. I found the offending record and the XML_BLOB actually only

I am having similar problems trying to read reactome files in BP level 3 programmatically with

No, there's no way to skip invalid files within a directory. It's actually intentionally

Ruth: To fix this, you need to update build.properties: log4j.file= XXX Ethan Ruth wrote: > Hi,

Hi, I have been trying to get the source from cvs -d :ext:anon...@cbiocvs2.nci.nih.gov:/share/

Hi Rob, Thanks for the update. Sorry we didn't have a chance to reply before you figured it out.

Rex, If you are interested in writing a more generic / better proxy handler for Cytoscape, that would

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Hi, Looks like there is a typo in the administrator guide. The "-f" is for specifying files

Fong, Today, I switched over to MySQL 5.0 on Mac OS X, and unfortunately, I am not able to recreate

Hi, I am following the cPath Administrator Guide in installing cPath and I have having problems at

Hi Sabry - An updated version of the source code is now (as of last week) available via the Cytoscape

cpath-dev, Version .6 beta. According to docs/INSTALL.txt: 4. Load a Demo Set of Sample data cd [

Hi Iain, Sorry for the delay - we're still in a massive grant crunch until the end of the month.

It's rare that you can find a small change that can make such a marked difference, but I believe

Hello: A while back, a few people reported issues related to cPath running on MySQL 4.1. As we are

Hi Iain: > > Hi there, > > I'm currently working on a ways to improve the import

All my jars are signed properly and everything works if I run my .jnlp as a local file. The problem

Hello David, I haven't actually tested cPath with MySQL 4.1 (we are still primarily running under

Though they are set as records are imported, so if you create another instance of cPath and import a

Hi Iain, We're using the 4.0 series here. We have not tested using 4.1. We should make this

Hi Iain, Thanks for doing this. Can you also post your revised LuceneConfig.java file, or just email

Thanks for the code Gary. Hopefully I'll be able to play with it next week. Thanks for the offer,

Thanks for the feedback Iain. We've worked closely with HPRD recently to help them update their

Hi Iain, Actually, I just realized that this is a logged bug that is high priority to get fixed. I

Hello Iain, Thanks, we always appreciate bug reports. Fortunately, this is an easy fix. We currently

Hi Iain, Your first insert statement needs to be: INSERT INTO external_db_cv VALUES ('33',