First, "The Evolution of BioBike: Community Adaptation of a
Biocomputing Platform" has just appeared in "Studies in History and
Philosophy of Science" (v38, pp642-656).
A draft of this paper can be read here:
http://nostoc.stanford.edu/jeff/temp/jhps20060830.pdf
Due to copyright restrictions I can't post the final paper, but I can
send it to those who are interested if you email me directly. (And, of
course, those of your at or near universities (or who are insane and
personally subscribe to this journal) can read in "the flesh".)
Second, we've just submitted a paper describing the BioBike Visual
Programming System, which does Lisp (actually BBL, a bio-specific sub-
language) in a whizzy ajaxy nestedy boxy thingy.
You can read the submitted draft here:
http://nostoc.stanford.edu/jeff/personal/vita/pubs/bblvplsubmitted20071215.doc
And, of course, play with the demo server here:
(Be sure to select VPL when you login, otherwise you end up with just
a plain old web-based lisp listener.)
Enjoy!
'Jeff