Re: [circos] Problems installing Circos

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Martin Krzywinski

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Aug 8, 2012, 8:49:31 PM8/8/12
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This writeup is helpful:


What errors are you seeing?

Martin Krzywinski
science + art




On Mon, Aug 6, 2012 at 11:06 AM, Alejandro Quiroz Zárate <alejan...@gmail.com> wrote:
Hi all

I have been trying to install circos and I haven't been successful. The only library that I'm having problems with is GD. I have tried everything, even this http://www.sharedproteomics.com/forum/showthread.php?325-Installing-GD-on-Mac-OSX-10.6

Is it possible that I can have some suggestions?

I have Mac OS X 10.7.4

Thanks so much!
Alejandro Quiroz

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Martin Krzywinski

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Aug 13, 2012, 7:29:07 PM8/13/12
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You can find libgd here



Martin Krzywinski
science + art




On Mon, Aug 13, 2012 at 4:26 PM, dquarless10 <dqua...@gmail.com> wrote:
Hello Martin,

I seem to be having the same issue with the GD library. I cannot install the GD, GD::Image, or GD::Polyline module from cpan. Everytime I try to install the GD image I get the error "Could not find gdlib-config in the search path. Please install libgd 2.0.28 or higher.", but when I go to look for it online I cannot find it. Is there a direct link that you know of for the library?

Thank you,

Danjuma

On Wednesday, August 8, 2012 5:49:31 PM UTC-7, Martin wrote:
What errors are you seeing?

Martin Krzywinski
science + art




On Mon, Aug 6, 2012 at 11:06 AM, Alejandro Quiroz Zárate <alejan...@gmail.com> wrote:
Hi all

I have been trying to install circos and I haven't been successful. The only library that I'm having problems with is GD. I have tried everything, even this http://www.sharedproteomics.com/forum/showthread.php?325-Installing-GD-on-Mac-OSX-10.6

Is it possible that I can have some suggestions?

I have Mac OS X 10.7.4

Thanks so much!
Alejandro Quiroz

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Martin Krzywinski

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Aug 31, 2012, 7:54:05 PM8/31/12
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Can you post the full error? 

The lipo error means something has gone wrong upstream.

Martin Krzywinski
science + art




On Thu, Aug 30, 2012 at 9:16 PM, mn72 <manjari...@gmail.com> wrote:
Hello Martin, 

I have the same problem as Alejandro and I tried this  http://zientzilaria.heroku.com/blog/2012/06/03/installing-circos-on-os-x/ as well as other various tips, as well as the libgd libraries.

gdlib-config --all confirms that I have GD 2.0.33. 

I always fail GD compilation due to lipo: can't open input file: tmp//ccdt4WYr.out (No such file or directory) and other errors of this form. 

Thanks


On Wednesday, August 8, 2012 7:49:31 PM UTC-5, Martin wrote:
What errors are you seeing?

Martin Krzywinski
science + art




On Mon, Aug 6, 2012 at 11:06 AM, Alejandro Quiroz Zárate <alejan...@gmail.com> wrote:
Hi all

I have been trying to install circos and I haven't been successful. The only library that I'm having problems with is GD. I have tried everything, even this http://www.sharedproteomics.com/forum/showthread.php?325-Installing-GD-on-Mac-OSX-10.6

Is it possible that I can have some suggestions?

I have Mac OS X 10.7.4

Thanks so much!
Alejandro Quiroz

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