Registration
Manju
I want to try the rigid registration with CERR. Will you please let me
know the username and password of ftp server
I have Matlab 2009a and Visual Studio 2008 on my laptop.
Thanks for help
-Manju
Apte, Aditya
CERR can be downloaded from http://radium.wustl.edu/CERR/about.php
It contains manual and automatic rigid / deformable registration under
Scan --> Image Fusion.
Please refer to the wiki page for a brief introduction.
http://radium.wustl.edu/wiki/index.php/Registration
Regards,
Aditya
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manju prashar
manju prashar
I have two CBCT scans taken at different times with structure information. I want to find the non-overlap area/volume between the same structure in two scans- somewhat like deformation estimation. Do you have any idea how it can be done.
Thanks
-Manju
Apte, Aditya
Here is a suggestion:
STEP 1> Import the two data sets individually and store them as two separate .mat (or .mat.bz2 if you wish to compress) files.
STEP 2> Load 1st file in CERR.
STEP 3> Merge the other file using File à Merge Plans tool
STEP 4> Register the two scans using Scan à Image Fusion
STEP 5> Say, you want “deformation estimation” for structure named “Lung”. Say, it’s index is number 9 for scan 1 and number 25 for scan 2.
STEP 6> Copy “Lung” structure from scan 2 to scan 1 using structure à Copy from one scan to other
STEP 7> Now create a non-overlap structure using Structure à Derive new structure. This structure can be derived as A(union)B – A(intersection)B
STEP 8> Now, compute DVH (or IVH) for new structure using Metrics à Dose Volume histogram. It would give you the volume of this structure in cc.
Regards,
Aditya
manju prashar
Somehow the registration module is not working well. I am not seeing the options on rigid registration. I have attached the file. Will you please let me know what can be the reason.
Thanks
Apte, Aditya
Hi Manju,
I recall that someone else reported similar behavior for Matlab 2009. This issue went away by using another Matlab version. May be you can use manual registration to check out the workflow for now.
Regards,
Aditya
From: cerr-...@googlegroups.com [mailto:cerr-...@googlegroups.com] On Behalf Of manju prashar
Sent: Friday, December 18, 2009
3:26 PM
To: cerr-...@googlegroups.com
Manju
On Dec 18, 3:28 pm, "Apte, Aditya" <aa...@radonc.wustl.edu> wrote:
> Hi Manju,
>
> I recall that someone else reported similar behavior for Matlab 2009.
> This issue went away by using another Matlab version. May be you can use
> manual registration to check out the workflow for now.
>
> Regards,
>
> Aditya
>
> ________________________________
>
> From: cerr-...@googlegroups.com [mailto:cerr-...@googlegroups.com]
> On Behalf Of manju prashar
> Sent: Friday, December 18, 2009 3:26 PM
> To: cerr-...@googlegroups.com
> Subject: Re: [cerr-forum:960] Registration
>
> Hi Aditya
> Somehow the registration module is not working well. I am not seeing the
> options on rigid registration. I have attached the file. Will you please
> let me know what can be the reason.
> Thanks
>
> On Fri, Dec 18, 2009 at 3:04 PM, Apte, Aditya <aa...@radonc.wustl.edu>
> wrote:
>
> Hi Manju,
>
> CERR can be downloaded fromhttp://radium.wustl.edu/CERR/about.php
>
> It contains manual and automatic rigid / deformable registration under
> Scan --> Image Fusion.
>
> Please refer to the wiki page for a brief introduction.http://radium.wustl.edu/wiki/index.php/Registration
>
> Regards,
> Aditya
>
> -----Original Message-----
> From: cerr-...@googlegroups.com [mailto:cerr-...@googlegroups.com]
>
> On Behalf Of Manju
> Sent: Friday, December 18, 2009 3:02 PM
> To: CERR FORUM
> Subject: [cerr-forum:955] Registration
>
> Hello
> I want to try the rigid registration with CERR. Will you please let me
> know the username and password of ftp server
> I have Matlab 2009a and Visual Studio 2008 on my laptop.
> Thanks for help
> -Manju
>
> --
>
> You received this message because you are subscribed to the Google
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>
> The materials in this message are private and may contain Protected
> Healthcare Information. If you are not the intended recipient, be
> advised that any unauthorized use, disclosure, copying or the taking of
> any action in reliance on the contents of this information is strictly
> prohibited. If you have received this email in error, please immediately
> notify the sender via telephone or return mail.
>
> --
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>
> --
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