I've annotated 580 sequences and now like to select a subset (to then
export it, retrieve the sequence ID's and run Fisher's exact). However I am
stuck already with the first step. Clicking on Select I have tried Select
by Sequence Name/ID, Select by Sequence Description and Select by Functions
(GO-Terms or GO-IDs) - the last one, is what I want - but writing
e.g. "protein binding" in the text field I am always either getting zero
selections. What I really wanted is select all sequence that
have "developmental process" annotated (which is a level 2 biological
process). Putting this in the text box usually selects all 580 sequences.
To tackle the problem differently: is there a way to export data not with
the parental GOs but derived ones (like "developmental process") I could
then just get my sequence IDs from the the textfile?