If your protein is in the pellets I hope you are using denaturing conditions to solubilize it before purification over Ni-NTA.
solubilize the protein in urea or guanidine for one hour and spin down to get a clear lysis solution before you proceed to further purification steps Ni-NTa or gel.
cheers
wajahat
> Date: Fri, 4 Sep 2009 20:29:26 +0530
> From: monicam...@yahoo.com
> To: prot...@magpie.bio.indiana.edu
> CC:
> Subject: [Protein-analysis] QUERY
>
> HI
> I'M FACING PROBLEM IN PURIFYING A protein which is a dna binding protein but its showing a kind of hydrophobic behaviour as its max part is going into pellet after lysis.
> moreover its not responding to ni2+ nta column also and the lysis sol. is not so clear that i go for gel filteration as it may probably clog it
> so can u suggest any solution?
>
> monica
>
>
>
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