help

[Harris, Charles]

i am a big fan of gps which i have used a lot to look at gene expression activity chart for genes of interest. however, i would like to know how to do a converse search . for example, is it possible to find genes only expressed in my tissue of interest. of course some additional parameters for such a search would be needed including the maxiimum expression level in a secondary tissue. thank you for your help.

Charles Harris MD/PhD
Assistant Professor
Department of Medicine
Division of Endocrinology, Metabolism and Lipid Research
Washington University School of Medicine
Phone: (314) 362-2967
FAX: (314) 362-7641

[Andrew Su]

Hello,

Glad to hear you are finding BioGPS to be useful. There are two
options for you.

First, you can find a gene that has your expression pattern of
interest, and then use the "Search by correlation" feature. (See
attached screenshot.) You then have to download those results, open
them in your favorite spreadsheet program, then copy them back into
the BioGPS search box.

Second, you can download all the raw data from our downloads page
(http://biogps.org/downloads/) where you can have full control over
your query and filtering criteria.

Hope that helps...

Cheers,
-andrew

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