Re: Abridged summary of bio-phylo@googlegroups.com - 3 Messages in 2 Topics

[László Nagy]

Hi Rutger,

thanks for the hint with the insert() function. I figured I will have to use the create_character function to create a new character object, fill it up with the states for each taxa and then insert it into a matrix. So the problem is that I cant seem to find how I can put my data into a character object. I currently have them in a hash (taxonname x charstate).

Thanks in advance!
Laszlo

2012/9/13 <bio-...@googlegroups.com>

  Today's Topic Summary

Group: http://groups.google.com/group/bio-phylo/topics

• rerooting trees - set_root_node [1 Update]
• Abridged summary of bio-...@googlegroups.com - 1 Message in 1 Topic [2 Updates]

 rerooting trees - set_root_node

"László Nagy" <cortina...@gmail.com> Sep 13 11:28AM -0400  

Hi All,
 
I am trying to midpoint root raxml trees. After getting the midpoint, I
reroot the trees using set_root_node. However, the rerooted tree contains
only the subtree of the original tree ...more

 Abridged summary of bio-...@googlegroups.com - 1 Message in 1 Topic

"László Nagy" <cortina...@gmail.com> Sep 12 02:02PM -0400  

Hi Rutger,
 
thanks, but I still cant find how to add characters. I might have not
noticed something very basic. Is there something like add_new_character, or
a method to add new entry to the ...more

Rutger Vos <rutge...@gmail.com> Sep 13 09:31AM +0100  

Hi László,
 
if you add a matrix row that is longer than the current nchar, more
characters will be added. If you want to add characters by hand, you
can do something like:
 
my $chars = ...more

You received this message because you are subscribed to the Google Group bio-phylo.
You can post via email.
To unsubscribe from this group, send an empty message.
For more options, visit this group.

--
You received this message because you are subscribed to the Google Groups "bio-phylo" group.
To post to this group, send email to bio-...@googlegroups.com.
To unsubscribe from this group, send email to bio-phylo+...@googlegroups.com.
For more options, visit this group at http://groups.google.com/group/bio-phylo?hl=en.