Viewing annotated MS/MS2 spectra for several candidate peptides
264 views
Skip to first unread message
Theo Sturm
Feb 7, 2012, 9:06:57 AM2/7/12
to Andromeda Help
Whereas it is easy to view annotated MS/MS spectra of second and
third
scoring candidate peptides for a given MS/MS spectrum in the
ProteomeDiscoverer, we were not able to find this feature in the
MaxQuant viewer (for the first scoring peptides this was no problem).
However, the Andromeda paper (Cox et al., 2011) says: “…, the
annotated spectrum can be inspected for the highest scoring and all
other candidate peptide sequences.” Is this also true for the
MaxQuant-
integrated version of Andromeda? If yes, how to do?
Thank you for consideration,
Theo Sturm
third
scoring candidate peptides for a given MS/MS spectrum in the
ProteomeDiscoverer, we were not able to find this feature in the
MaxQuant viewer (for the first scoring peptides this was no problem).
However, the Andromeda paper (Cox et al., 2011) says: “…, the
annotated spectrum can be inspected for the highest scoring and all
other candidate peptide sequences.” Is this also true for the
MaxQuant-
integrated version of Andromeda? If yes, how to do?
Thank you for consideration,
Theo Sturm
Reply all
Reply to author
Forward
0 new messages