[ADMB Users] ADMB meeting in Reykjavik - Doodle Poll

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Arni Magnusson

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Jun 13, 2013, 5:07:23 PM6/13/13
to devel...@admb-project.org, us...@admb-project.org, Athol Whitten, Rishi Sharma, Andre Punt, Dave Fournier, Kasper Kristensen, Laurie Kell, Polina Levontin
Dear friends,

The upcoming ADMB Developers' workshop in Reykjavik in September was
discussed a bit at the ADMB Foundation board meeting last week. There are
two other relevant conferences taking place in Reykjavik in the same
month:

12-14 Sep (Thu-Sat), LGM conference in Reykjavik
https://sites.google.com/site/lgm2013ice/

23-27 Sep (Mon-Fri), ICES conference in Reykjavik
http://ices.dk/news-and-events/asc/ASC-2013/Pages/default.aspx

Initially, we (Anders, Arni, Hans) scheduled the ADMB meeting 8-11
September, just prior to the LGM conference. Now that our LGM abstract has
been rejected, our focus is shifting to the ICES conference.

It seems likely that some ADMB-oriented people might attend the ICES
conference. To make it practical to visit Iceland and attend both the ADMB
and ICES events, we could shift the ADMB meeting to be just before or
after the ICES meeting.

---

Therefore, I have set up a Doodle Poll:

http://doodle.com/dx5et3fe4dfp2d48

Please mark the days that you would _prefer_. If there are days you
_cannot_ make it, please email me so I can take that into account. Ignore
this poll if you don't plan to attend. Feel free to forward this email to
others.

At the end of the poll, we are looking for a 4-day slot for the ADMB
meeting.

The range between 17 Sep and 1 Oct would be practical for anyone planning
to attend both the ADMB and ICES events. If I'm the only one attending
both, there may be no practical reason to shift the ADMB meeting.

Let's finish this poll before Wednesday (19 June) and make a decision.

Looking forward to welcoming you to Iceland this autumn,

Arni

P.S. If you urgently need a reason to attend the ICES conference, I can
add you as a coauthor on a simple paper that's been accepted in Session Q
on Bayesian methods. Your contribution would be in the introduction and
discussion sections. This might help convince your employer about the need
to travel to Reykjavik this autumn.
_______________________________________________
Users mailing list
Us...@admb-project.org
http://lists.admb-project.org/mailman/listinfo/users

Rubén Roa

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Jun 14, 2013, 4:29:34 AM6/14/13
to Arni Magnusson, devel...@admb-project.org, us...@admb-project.org, Athol Whitten, Rishi Sharma, Laurie Kell, Dave Fournier, Kasper Kristensen, Andre Punt, Polina Levontin

Hi,

FYI, the methods ICES working group (WGMG) is planning its annual meeting in Reykjavik just after the ICES meeting.

Ruben

--
Rubén H. Roa-Ureta, Ph. D.
AZTI Tecnalia, Txatxarramendi Ugartea z/g,
Sukarrieta, Bizkaia, SPAIN

Peter Stephenson

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Jun 13, 2013, 10:14:25 PM6/13/13
to Arni Magnusson, devel...@admb-project.org, us...@admb-project.org, Athol Whitten, Rishi Sharma, Laurie Kell, Dave Fournier, Kasper Kristensen, Andre Punt, Polina Levontin
Gary, look at the first name in the CC.
Should I being keeping in contact with him. Is he a high flyer. The CC group are pretty heavy hitters.
Peter

-----Original Message-----
From: users-...@admb-project.org [mailto:users-...@admb-project.org] On Behalf Of Arni Magnusson
Sent: Friday, 14 June 2013 5:07 AM
To: devel...@admb-project.org; us...@admb-project.org
Cc: Athol Whitten; Rishi Sharma; Andre Punt; Dave Fournier; Kasper Kristensen; Laurie Kell; Polina Levontin
Subject: [ADMB Users] ADMB meeting in Reykjavik - Doodle Poll

Laurie Kell

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Jun 14, 2013, 3:43:34 AM6/14/13
to Arni Magnusson, Finlay Scott, Athol Whitten, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Dave Fournier, Kasper Kristensen, Rishi Sharma, Polina Levontin
Well I would have forwarded it to Finlay if he hadnt deserted Lowestoft
for Italy!

Laurie
On 14/06/13 09:41, Laurie Kell wrote:
> I think this a really important meeting and I would have loved to
> attend. Unfortunately it clashes with our main Scientific meeting at ICCAT.
>
> I am forwarding this email to Finlay as he has started developing a
> tools based on Rcpp to help integrate ADMB and R.
>
> Laurie

Mark Payne

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Jun 14, 2013, 4:40:21 AM6/14/13
to Arni Magnusson, devel...@admb-project.org, us...@admb-project.org, Athol Whitten, Dave Fournier, Laurie Kell, Kasper Kristensen, Rishi Sharma, Andre Punt, Polina Levontin
Have you considered having a users session on the side of the ASC - after all, there will be many of the ICES users there.... Wednesday afternoon is usually free for that sort of thing. And it might be nice for some of us non-developers to chat with you, hear future directions, and give feedback....

Mark
________________________________________
Fra: users-...@admb-project.org [users-...@admb-project.org] på vegne af Arni Magnusson [arn...@hafro.is]
Sendt: 13. juni 2013 23:07
Til: devel...@admb-project.org; us...@admb-project.org
Cc: Athol Whitten; Rishi Sharma; Andre Punt; Dave Fournier; Kasper Kristensen; Laurie Kell; Polina Levontin
Emne: [ADMB Users] ADMB meeting in Reykjavik - Doodle Poll

dave fournier

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Jun 14, 2013, 10:32:00 AM6/14/13
to Mark Payne, Laurie Kell, Athol Whitten, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Kasper Kristensen, Rishi Sharma, Polina Levontin
On 13-06-14 01:40 AM, Mark Payne wrote:


I wish that all the players could be encouraged to discuss future
directions BEFORE the actual meeting.
I think that is what the mail lists are for. There is not enough time
at a meeting to initiate a discussion on
any substantive issue and develop it to a useful level.

For example at the recent meeting Sibert and I presented some results on
multi-threading which indicate
that it can be useful enough for ADMB programs to justify serious
development efforts. Getting this together
required about 3 months of programming/discussion to prepare for the
meeting.

With regard to multi-threading, this looks interesting.

http://www.tomshardware.com/news/Intel-Xeon-Phi-Coprocessor-CPU,22700.html

Dave

Richard Methot - NOAA Federal

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Jun 14, 2013, 1:57:41 PM6/14/13
to Mark Payne, Kasper Kristensen, Athol Whitten, us...@admb-project.org, Andre Punt, devel...@admb-project.org, Laurie Kell, Dave Fournier, Rishi Sharma, Polina Levontin
I support having a short session during ASC.
--
Richard D. Methot Jr. Ph.D.
NOAA Fisheries - Science Advisor for Stock Assessments
Office: 206-860-3365
Mobile: 301-787-0241

Laurie Kell

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Jun 14, 2013, 3:41:16 AM6/14/13
to Arni Magnusson, Athol Whitten, us...@admb-project.org, Finlay Scott (Cefas), devel...@admb-project.org, Andre Punt, Dave Fournier, Kasper Kristensen, Rishi Sharma, Polina Levontin
I think this a really important meeting and I would have loved to
attend. Unfortunately it clashes with our main Scientific meeting at ICCAT.

I am forwarding this email to Finlay as he has started developing a
tools based on Rcpp to help integrate ADMB and R.

Laurie


On 13/06/13 23:08, Arni Magnusson wrote:

Mark Maunder

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Jun 14, 2013, 2:34:49 PM6/14/13
to Richard Methot - NOAA Federal, Mark Payne, Athol Whitten, Dave Fournier, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Kasper Kristensen, Rishi Sharma, Laurie Kell, Polina Levontin

What is ASC?

Laurie Kell

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Jun 14, 2013, 4:01:37 PM6/14/13
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multi-threading is something that I would like to be involved in, and I know of others who would be keen to collaborate.

Laurie

bigA

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Jun 14, 2013, 5:33:13 PM6/14/13
to Mark Maunder, Athol Whitten, Kasper Kristensen, Laurie Kell, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Dave Fournier, Rishi Sharma, Polina Levontin
Just a follow up to what Dave suggested about things to talk about at the developer meeting.
I don't know how people feel about potentially adding limited read time plotting capability to admb. 
There are several c++ libraries that may make that not particularly difficult.  
I think the idea should be to provide simple line graphs and scatter plotting routines, not provide "publication" quality graphics.
I realize that realtimeplot is licensed under the GPL; if there is interest and it is needed I could try to find a good library that is BSD licensed.
Obviously there are things like KST that can partially solve this problem at the expense of having to write data to files. 
However, sometimes I think it would be cool to be able watch admb work.   



Aaron

Ian Taylor - NOAA Federal

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Jun 14, 2013, 6:51:41 PM6/14/13
to Mark Maunder, Athol Whitten, Laurie Kell, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Kasper Kristensen, Rishi Sharma, Polina Levontin
Mark, 
ASC seems to be the ICES Annual Science Conference (Reykjavík, 23–27 September):
http://ices.dk/news-and-events/asc/ASC-2013/Pages/default.aspx


On Fri, Jun 14, 2013 at 11:34 AM, Mark Maunder <mmau...@iattc.org> wrote:
_______________________________________________
Developers mailing list
Devel...@admb-project.org
http://lists.admb-project.org/mailman/listinfo/developers


dave fournier

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Jun 14, 2013, 7:02:50 PM6/14/13
to bigA, Athol Whitten, Laurie Kell, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Kasper Kristensen, Rishi Sharma, Polina Levontin
On 13-06-14 02:33 PM, bigA wrote:

I did this a long time ago using Java. That is why there are a bunch of java references in the code.
But Sun kept changing the JNI and breaking my code so I gave up on it. 

Another simple way to have real time graphics  is via a named pipe and using R for the graphics.  I did this
with Pierre Kleiber using S intead of R about 20 years ago on some kind of unix box.


Ian Taylor - NOAA Federal

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Jun 14, 2013, 7:25:56 PM6/14/13
to dave fournier, Athol Whitten, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Kasper Kristensen, Rishi Sharma, Laurie Kell, Polina Levontin
What?!?
You aren't all satisfied spending hours staring at tables of gradients of transformed parameters moving across the screen? Or MCMC acceptance rates?

dave fournier

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Jun 14, 2013, 8:34:38 PM6/14/13
to Ian Taylor - NOAA Federal, Athol Whitten, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Kasper Kristensen, Rishi Sharma, Laurie Kell, Polina Levontin
On 13-06-14 04:25 PM, Ian Taylor - NOAA Federal wrote:

Well I was, but this was for the unwashed at the American Statistical Society Meeting in Baltimore
where we sold $0 worth of software.  My wife came along as my keeper. We called it Ma and Pa
software (in our heads).

dave fournier

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Jun 14, 2013, 8:35:54 PM6/14/13
to Laurie Kell, Athol Whitten, us...@admb-project.org, devel...@admb-project.org, Andre Punt, Kasper Kristensen, Rishi Sharma, Polina Levontin
On 13-06-14 01:01 PM, Laurie Kell wrote:


I'm happy to collaborate, but how would it function. I only want to
do 90% of the work.

Arni Magnusson

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Jul 3, 2013, 7:58:24 PM7/3/13
to devel...@admb-project.org, us...@admb-project.org, Kasper Kristensen
The Developers' Workshop in Iceland has been shifted to:

18-22 September 2013 (Wed-Sun)

This is done to maximize our impact at the ICES conference starting on the
23rd. Details will unfold on:

http://admb-project.org/developers/workshop/reykjavik-2013

If you plan to attend, please send me an email, so we can start looking
into accommodation, etc.

Arni

P.S. Let me use the same email to mention that a new set of manuals (ADMB,
ADMB-RE, AUTODIF) are now available on
http://code.google.com/p/admb-project/downloads/list. The changes are
mainly cosmetic improvements, legible fonts etc.
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