NGS Group APS Sheffield - Google Groups

Groups

Contact the owners and managers

1–27 of 27

Ludovic will continue with the 2nd part of his target resequencing presentation on Wednesday 6 March 2013. Location and time as usual: B52, 2-3pm.

Here is a link to some resources of the group

https://sites.google.com/site/ngsshef

0 selected

Clemens Küpper, Jenny Kaden2

11/12/2014

{NGS Group APS Sheffield} Downstream effects of carrier RNA in RAD/ddRAD

Hi Clemens! Thanks for the info. If we need to use the carrier RNA we'll just go ahead and use it

unread,

{NGS Group APS Sheffield} Downstream effects of carrier RNA in RAD/ddRAD

Hi Clemens! Thanks for the info. If we need to use the carrier RNA we'll just go ahead and use it

11/12/2014

10/12/2014

Downstream effects of carrier RNA in RAD/ddRAD

Hello all, Bit of a wet lab question. Does anyone know the effect carrier RNA might have on a ddRAD

unread,

Downstream effects of carrier RNA in RAD/ddRAD

Hello all, Bit of a wet lab question. Does anyone know the effect carrier RNA might have on a ddRAD

10/12/2014

claudiuskerth, … Ludovic Duvaux3

31/07/2014

omic tools website

The same goes for me! I mean I'm sure it will be useful!!! Great thanks, Ludo On 31/07/14 17:05,

unread,

omic tools website

The same goes for me! I mean I'm sure it will be useful!!! Great thanks, Ludo On 31/07/14 17:05,

31/07/2014

04/12/2013

New R Package to conduct Population genetic analysis

Hi all, there is a new R package available called PopGenome (http://cran.r-project.org/web/packages/

unread,

New R Package to conduct Population genetic analysis

Hi all, there is a new R package available called PopGenome (http://cran.r-project.org/web/packages/

04/12/2013

18/09/2013

How to compare genetic diversity between regions? (especially in non-syn SNPs)

Dear All, We are trying to work out a specific problem I was hoping for your advice. We are looking

unread,

How to compare genetic diversity between regions? (especially in non-syn SNPs)

Dear All, We are trying to work out a specific problem I was hoping for your advice. We are looking

18/09/2013

k.kim, Claudius Kerth3

13/09/2013

regex to match pattern allowing errors?

Good stuff Claudius, thanks!! I also made a script that deal with adapter sequence at the end as well

unread,

regex to match pattern allowing errors?

Good stuff Claudius, thanks!! I also made a script that deal with adapter sequence at the end as well

13/09/2013

claudiuskerth, Anna W Santure2

28/08/2013

Unix tutorials now on OpenWetWare

Hi Claudius, that looks fantastic, well done! I am sure I will be revisiting these pages many times

unread,

Unix tutorials now on OpenWetWare

Hi Claudius, that looks fantastic, well done! I am sure I will be revisiting these pages many times

28/08/2013

Caitriona McInerney, … Ludovic Duvaux4

14/08/2013

Another paper than can interest some of you: http://www.biomedcentral.com/1471-2164/14/542 Ludo On 08

unread,

Another paper than can interest some of you: http://www.biomedcentral.com/1471-2164/14/542 Ludo On 08

14/08/2013

Barney Wharam, Victor Soria-Carrasco2

12/08/2013

Help with SNP calling

Hi Barney, I am sorry I don't have too much time to look into this this week, but I have found

unread,

Help with SNP calling

Hi Barney, I am sorry I don't have too much time to look into this this week, but I have found

12/08/2013

c.mcinerney, Ludovic Duvaux2

01/08/2013

BAM to Fastq file conversion

Hi all, here is a thread on the SEQanswers forum if you want to learn more about this (ie if you want

unread,

BAM to Fastq file conversion

Hi all, here is a thread on the SEQanswers forum if you want to learn more about this (ie if you want

01/08/2013

a.westram, … Aaron Comeault4

26/07/2013

Hey Anja, We used BGI to sequence the Timema genome. They had troubles making the large insert

unread,

Hey Anja, We used BGI to sequence the Timema genome. They had troubles making the large insert

26/07/2013

claudiuskerth, … Afsaneh7

05/06/2013

file system navigation on Unix command line ... made easier

On 05/06/2013 12:31, Emma Gregson wrote: Dear Toni, I am currently using cufflinks on my RNAseq data,

unread,

file system navigation on Unix command line ... made easier

On 05/06/2013 12:31, Emma Gregson wrote: Dear Toni, I am currently using cufflinks on my RNAseq data,

05/06/2013

Barnaby Wharam, … Barney Wharam4

29/04/2013

Genome alignments for SNP discovery - missing chromosomes problem!

Hi Claudius/All, I tried the suggested strategy of changing the scaled mutation rate, I used the code

unread,

Genome alignments for SNP discovery - missing chromosomes problem!

Hi Claudius/All, I tried the suggested strategy of changing the scaled mutation rate, I used the code

29/04/2013

Clemens, … claudiuskerth6

12/04/2013

Bioinformatics / Pipelines

Hi Hazel, stacks should be the first tool you try out. It's a suite of programmes that in

unread,

Bioinformatics / Pipelines

Hi Hazel, stacks should be the first tool you try out. It's a suite of programmes that in

12/04/2013

Claudius Kerth (Google Drive)

11/03/2013

RAD_practical_Victor (ngsshef@googlegroups.com)

I've shared an item with you. RAD_practical_Victor Google Drive: create, share, and keep all your

unread,

RAD_practical_Victor (ngsshef@googlegroups.com)

I've shared an item with you. RAD_practical_Victor Google Drive: create, share, and keep all your

11/03/2013

29/01/2013

Computing Hardware / Iceberg Discussion

An short update from the CICS meeting and after some quotes from Dell: We try to take the best of

unread,

Computing Hardware / Iceberg Discussion

An short update from the CICS meeting and after some quotes from Dell: We try to take the best of

29/01/2013

NGS group APS (Google Drive)

21/01/2013

Intro to Genomics - resources for presentations and workshops (ngsshef@googlegroups.com)

I've shared an item with you. Intro to Genomics - resources for presentations and workshops

unread,

Intro to Genomics - resources for presentations and workshops (ngsshef@googlegroups.com)

I've shared an item with you. Intro to Genomics - resources for presentations and workshops

21/01/2013

NGS group APS (Google Drive)

14/01/2013

Introduction to Genomics Workshop (ngsshef@googlegroups.com)

I've shared an item with you. Introduction to Genomics Workshop Google Drive: create, share, and

unread,

Introduction to Genomics Workshop (ngsshef@googlegroups.com)

I've shared an item with you. Introduction to Genomics Workshop Google Drive: create, share, and

14/01/2013

claudiuskerth, Ludovic Duvaux4

09/11/2012

think parallel !

Hi, well may be a bit complicated for people not familiar with scripting but let's try to explain

unread,

think parallel !

Hi, well may be a bit complicated for people not familiar with scripting but let's try to explain

09/11/2012

02/11/2012

Google site for NGS group

Hi folks, please check out the website: https://sites.google.com/site/ngsshef There you'll find a

unread,

Google site for NGS group

Hi folks, please check out the website: https://sites.google.com/site/ngsshef There you'll find a

02/11/2012

ngs...@gmail.com

31/10/2012

ngsshef@gmail.com has shared a calendar with you

Hello NGS Group APS Sheffield, We are writing to let you know that ngs...@gmail.com has given you

unread,

ngsshef@gmail.com has shared a calendar with you

Hello NGS Group APS Sheffield, We are writing to let you know that ngs...@gmail.com has given you

31/10/2012

NGS group APS (Google Sites)

30/10/2012

ngsshef (ngsshef@googlegroups.com)

I've shared ngsshef Click to open: ngsshef Google Sites makes creating and sharing a group

unread,

ngsshef (ngsshef@googlegroups.com)

I've shared ngsshef Click to open: ngsshef Google Sites makes creating and sharing a group

30/10/2012

NGS group APS (Google Drive)

30/10/2012

ComplexityReduction (ngsshef@googlegroups.com)

I've shared an item with you. ComplexityReduction Google Drive: create, share, and keep all your

unread,

ComplexityReduction (ngsshef@googlegroups.com)

I've shared an item with you. ComplexityReduction Google Drive: create, share, and keep all your

30/10/2012

12/10/2012

Workshops, Conferences etc

Gavin and me want to start learning ourselves Python. We found a number of good web resources, for

unread,

Workshops, Conferences etc

Gavin and me want to start learning ourselves Python. We found a number of good web resources, for

12/10/2012

NGS Group APS Sheffield

12/10/2012

Victor has already set up the Zotero Group where we can share and comment relevant literature. Please

unread,

Victor has already set up the Zotero Group where we can share and comment relevant literature. Please

12/10/2012

NGS Group APS Sheffield

10/10/2012

Post anything particular about the RAD Tag method

unread,

Post anything particular about the RAD Tag method

10/10/2012

NGS Group APS Sheffield

10/10/2012

Post here if you want to share something about the Molecular Work in the Lab.

unread,

Post here if you want to share something about the Molecular Work in the Lab.

10/10/2012

Search

Clear search

Close search

Google apps

Main menu