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sarab...@gmail.com
,
Alex Pico
2
1/10/14
to merge some selected networks that are find by GO-Elite
In Cytoscape, there is a Network Merge function that may or may not work with imported pathways. I
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to merge some selected networks that are find by GO-Elite
In Cytoscape, there is a Network Merge function that may or may not work with imported pathways. I
1/10/14
sarab...@gmail.com
,
Alex Pico
2
1/10/14
Loading Pathway
Hi Sara, this project is no longer funded nor actively supported, but we are still working on related
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Loading Pathway
Hi Sara, this project is no longer funded nor actively supported, but we are still working on related
1/10/14
Konika Chawla
, …
Alexander Pico
12
10/15/13
Import dataset from table- not working
Great video. This wass the first time we received a youtube bug report. It's really helpful!
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Import dataset from table- not working
Great video. This wass the first time we received a youtube bug report. It's really helpful!
10/15/13
francina
,
Kristina Hanspers
2
9/30/13
Regarding Pathway gene association file for input gene list
Hi Maggi, We are no longer actively developing GenMAPP 2.1. Instead, we are now developing and
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Regarding Pathway gene association file for input gene list
Hi Maggi, We are no longer actively developing GenMAPP 2.1. Instead, we are now developing and
9/30/13
Richard Sanchez
, …
GenMAPP Support
4
9/6/13
Genmapp-CS: Problem with time course data analysis
Hi Richard, It may be a few months before this feature is completed in GenMAPP-CS. In the meantime, I
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Genmapp-CS: Problem with time course data analysis
Hi Richard, It may be a few months before this feature is completed in GenMAPP-CS. In the meantime, I
9/6/13
chaoqi...@gmail.com
,
Kristina Hanspers
2
8/14/13
GenMapp-CS: Export identified pathways and genes that meets the criteria?
Hi Chao, You can get this information from the complete GO-Elite results: http://opentutorials.cgl.
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GenMapp-CS: Export identified pathways and genes that meets the criteria?
Hi Chao, You can get this information from the complete GO-Elite results: http://opentutorials.cgl.
8/14/13
xys113xys113
, …
Nandita Vishwanathan
3
8/13/13
The JVM could not be started.The main method may have thrown out an exception.
I am getting the same error. On Wednesday, January 30, 2013 12:49:15 PM UTC-6, Azileretsis Y wrote: I
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The JVM could not be started.The main method may have thrown out an exception.
I am getting the same error. On Wednesday, January 30, 2013 12:49:15 PM UTC-6, Azileretsis Y wrote: I
8/13/13
Tineke Notelaers
,
Alex Pico
2
7/29/13
Unable to load Network files
You're right. We released a new version of GPML and a new version of the GPML plugin. There isn
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Unable to load Network files
You're right. We released a new version of GPML and a new version of the GPML plugin. There isn
7/29/13
Nathan Salomonis
1/27/13
Re: [GenMAPP] WikiPathways vs KEGG Pathways
Hi Rad, Thanks for your email, see below: Although I appreciate the fact of including WikiPathways
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Re: [GenMAPP] WikiPathways vs KEGG Pathways
Hi Rad, Thanks for your email, see below: Although I appreciate the fact of including WikiPathways
1/27/13
Alex Pico
,
Jamie
3
9/28/12
Re: Affy Data mapping in GM-CS
Glad to hear it! The color of the update/download arrow next to the species database selector in the
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Re: Affy Data mapping in GM-CS
Glad to hear it! The color of the update/download arrow next to the species database selector in the
9/28/12
Alex Pico
9/5/12
Re: editing datasets whithin Genmapp-CS
There isn't a table editor, per se, but once imported, each row is associated with a node. If you
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Re: editing datasets whithin Genmapp-CS
There isn't a table editor, per se, but once imported, each row is associated with a node. If you
9/5/12
cadman7658
,
GenMAPP
2
9/3/12
a query for the GENMAPP cs2
Hi Cadman, I'm CC'ing the WikiPathways discussion list on this questions since I believe they
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a query for the GENMAPP cs2
Hi Cadman, I'm CC'ing the WikiPathways discussion list on this questions since I believe they
9/3/12
Alexander Pico
7/19/12
Re: [GenMAPP] Re: Bugs in GeneMAPP
Hi Josep, This is a common problem for identifier mapping. Just to describe the process in a bit more
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Re: [GenMAPP] Re: Bugs in GeneMAPP
Hi Josep, This is a common problem for identifier mapping. Just to describe the process in a bit more
7/19/12
GenMAPP
7/16/12
Re: [GenMAPP] GenMapp: the raw data conversion
Hi Ana, The file organization looks fine, however, the way your file is it will create a separate
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Re: [GenMAPP] GenMapp: the raw data conversion
Hi Ana, The file organization looks fine, however, the way your file is it will create a separate
7/16/12
vee
,
Alexander Pico
2
6/11/12
how to add new KEGG pathway
KEGG is no longer freely available. They switched to a service fee model. Fortunately, there are
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how to add new KEGG pathway
KEGG is no longer freely available. They switched to a service fee model. Fortunately, there are
6/11/12
Chunming
,
Martijn van Iersel
2
5/1/12
MPSS-CS can't download Oryza sativa database from "http://webservice.bridgedb.org"
Hi Chunming, You need the one named Oj_Derby_20100601.bridge, which you can download here: http://
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MPSS-CS can't download Oryza sativa database from "http://webservice.bridgedb.org"
Hi Chunming, You need the one named Oj_Derby_20100601.bridge, which you can download here: http://
5/1/12
Soon Sen
,
GenMAPP
2
4/23/12
System Code Error
Hi Soon, This is a very interesting error. I found that it occurs because there are two MGI tables in
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System Code Error
Hi Soon, This is a very interesting error. I found that it occurs because there are two MGI tables in
4/23/12
IngeH
,
Kristina Hanspers
2
2/28/12
ID conversion
Hi Inge, We are no longer developing the “classic” GenMAPP program, and the databases that are
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ID conversion
Hi Inge, We are no longer developing the “classic” GenMAPP program, and the databases that are
2/28/12
Max
,
GenMAPP Support
2
2/20/12
Tutorial links do not work.
Hi Max, The server that hosts the tutorials is down for maintenance until 6pm PST tonight. Sorry for
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Tutorial links do not work.
Hi Max, The server that hosts the tutorials is down for maintenance until 6pm PST tonight. Sorry for
2/20/12
cg...@hotmail.com
,
Alex Pico
2
11/21/11
Genmapp-cs problem
Hi Geoje, If you export as PDF or SVG, you should get a scalar graphic with high resolution lines. If
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Genmapp-cs problem
Hi Geoje, If you export as PDF or SVG, you should get a scalar graphic with high resolution lines. If
11/21/11
The Norwegian iGemTeam
, …
GenMAPP Support
5
8/19/11
Genmapp-CS Mac osx
Hi Michael, When you say the icon shows up on the dashboard and then disappears, do you mean the
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Genmapp-CS Mac osx
Hi Michael, When you say the icon shows up on the dashboard and then disappears, do you mean the
8/19/11
alice
,
GenMAPP Support
2
8/9/11
MAPP database
Hi Alice, Thank you for your interest in GenMAPP. We are no longer updating the GenMAPP 2.1 program,
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MAPP database
Hi Alice, Thank you for your interest in GenMAPP. We are no longer updating the GenMAPP 2.1 program,
8/9/11
alice
,
Nathan Salomonis
2
4/24/11
gene symbol as gene ID?
Hi Alice, These IDs used to be supported in older database versions (2006) by storing the gene
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gene symbol as gene ID?
Hi Alice, These IDs used to be supported in older database versions (2006) by storing the gene
4/24/11
DG
,
GenMAPP Support
2
3/28/11
download source code
Hello, Note that the GenMAPP source code that is available on SourceForge is Visual Basic. As far as
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download source code
Hello, Note that the GenMAPP source code that is available on SourceForge is Visual Basic. As far as
3/28/11
chaitali shah
3/3/11
Interested in GSoC 2011
Hello, Myself is Chaitali Shah, undergraduate student of Computer Engineering from Sardar Patel
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Interested in GSoC 2011
Hello, Myself is Chaitali Shah, undergraduate student of Computer Engineering from Sardar Patel
3/3/11
Alexander Pico
2/12/11
GSoC 2011: Call for New Mentors
It's that time of the year again! We have about two more weeks to put together our our Google
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GSoC 2011: Call for New Mentors
It's that time of the year again! We have about two more weeks to put together our our Google
2/12/11
Jeanette Garcia
,
GenMAPP Support
2
1/11/11
gene ID and system code
Hello Jeanette, The RefSeq system in the GenMAPP databases does include NM IDs, but it is possible
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gene ID and system code
Hello Jeanette, The RefSeq system in the GenMAPP databases does include NM IDs, but it is possible
1/11/11
Jeanette Garcia
1/11/11
help with opening MAPPbuilder
I`m new using GenMAPP, well: trying to use it :( I began to read the tutorial, i created the .txt
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help with opening MAPPbuilder
I`m new using GenMAPP, well: trying to use it :( I began to read the tutorial, i created the .txt
1/11/11
ling
,
GenMAPP Support
2
9/7/10
how to analyze the microarray data in non-supported species
Hello Ling, I'm sorry you're having problems with the accessory files. Although we haven'
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how to analyze the microarray data in non-supported species
Hello Ling, I'm sorry you're having problems with the accessory files. Although we haven'
9/7/10
gege
,
Nathan Salomonis
2
8/2/10
problem importing raw data file to .gex
Greetings Gege, GenMAPP can directly use Illumina IDs for mouse, where the first column of your
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problem importing raw data file to .gex
Greetings Gege, GenMAPP can directly use Illumina IDs for mouse, where the first column of your
8/2/10