melting-forum

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1–14 of 14

Welcome to the forum for the software Melting. This is a place for discussing about usability, implementing new feature requests and announcing new versions.

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Nicolas Gambardella

Mar 1

Melting now on GitLab

I moved all the MELTING code (v4 in C and v5 in Java) to GitLab, as well as associated information.

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Melting now on GitLab

I moved all the MELTING code (v4 in C and v5 in Java) to GitLab, as well as associated information.

Mar 1

Nicolas Le Novere

9/18/23

Re: Seeking help for MELTING

Dear CHEN Xin, You will find the software at: https://www.ebi.ac.uk/biomodels/tools/melting/ The web

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Re: Seeking help for MELTING

Dear CHEN Xin, You will find the software at: https://www.ebi.ac.uk/biomodels/tools/melting/ The web

9/18/23

Yuanyuan Wang, Nicolas Gambardella3

1/24/22

Trouble installing the 5.2.0 on mac

Dear Nicolas, Thank you so much for the suggestions! It solved my problems:-) Yuanyuan On Monday,

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Trouble installing the 5.2.0 on mac

Dear Nicolas, Thank you so much for the suggestions! It solved my problems:-) Yuanyuan On Monday,

1/24/22

Nicolas Le Novere

8/11/20

Looking for developers

Hello all, MELTING has seen a growing use over the years. Not only the Java version is used on a

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Looking for developers

Hello all, MELTING has seen a growing use over the years. Not only the Java version is used on a

8/11/20

S L, williamjo...@googlemail.com3

6/19/20

Confirm MELTING5.2.0 Wetmur-91 DNA:RNA salt model parameter is indeed `wet91` (works) and not `wetdnarna91` (in manual but errors tool)

> this does appear to be an error in the documentation. Thank you William for the quick follow up.

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Confirm MELTING5.2.0 Wetmur-91 DNA:RNA salt model parameter is indeed `wet91` (works) and not `wetdnarna91` (in manual but errors tool)

> this does appear to be an error in the documentation. Thank you William for the quick follow up.

6/19/20

5/7/20

Bug in MELTING5.x batch mode

I observed that the batch mode takes a very long time to process as the number of sequences becomes

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Bug in MELTING5.x batch mode

I observed that the batch mode takes a very long time to process as the number of sequences becomes

5/7/20

7/12/19

Doubly dangling DNA-DNA interactions for stitch ligation

Hi all, I was searching for software to calculate the viability/stability of doubly dangling DNA-DNA

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Doubly dangling DNA-DNA interactions for stitch ligation

Hi all, I was searching for software to calculate the viability/stability of doubly dangling DNA-DNA

7/12/19

noadv...@googlemail.com, Nicolas Le Novere4

2/22/19

Correction for Tris buffers

In the addition of packages, all the source code is available at: https://sourceforge.net/p/melting/

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Correction for Tris buffers

In the addition of packages, all the source code is available at: https://sourceforge.net/p/melting/

2/22/19

Nicolas Le Novere

2/22/19

R package for Melting5

I just discovered melting5jars, An R package wrapper for MELTING 5 jars. https://github.com/hrbrmstr/

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R package for Melting5

I just discovered melting5jars, An R package wrapper for MELTING 5 jars. https://github.com/hrbrmstr/

2/22/19

Nicolas Le Novere2

3/17/17

Re: MELTING software download

Dear Noreen, I strongly advise to use version 5 of the software, which is much more accurate and

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Re: MELTING software download

Dear Noreen, I strongly advise to use version 5 of the software, which is much more accurate and

3/17/17

javi...@gmail.com, Nicolas Rodriguez3

9/26/16

How to run the examples files thanks you

Forgot to mention that you have also to define the environment variable NN_PATH to be able to

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How to run the examples files thanks you

Forgot to mention that you have also to define the environment variable NN_PATH to be able to

9/26/16

Nicolas Rodriguez

6/2/16

using melting under windows

-------- Forwarded Message -------- Subject: melting software help I'd like to get the MELTING

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using melting under windows

-------- Forwarded Message -------- Subject: melting software help I'd like to get the MELTING

6/2/16

Nicolas Rodriguez

5/24/16

Is it possible to construct melting curves? [was Re: Melting 5 - How to run in batch mode]

Hi Tengiz, If you go to the melting online at EBI: http://www.ebi.ac.uk/biomodels/tools/melting/melt.

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Is it possible to construct melting curves? [was Re: Melting 5 - How to run in batch mode]

Hi Tengiz, If you go to the melting online at EBI: http://www.ebi.ac.uk/biomodels/tools/melting/melt.

5/24/16

Nicolas Rodriguez, … t.be...@agruni.edu.ge6

5/13/16

Melting 5 - How to run in batch mode

Hi Nicolas, How long molecules can be analyzed - 160 kb? On Wednesday, December 9, 2015 at 4:54:44 PM

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Melting 5 - How to run in batch mode

Hi Nicolas, How long molecules can be analyzed - 160 kb? On Wednesday, December 9, 2015 at 4:54:44 PM

5/13/16

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